Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq346 165 2e-35 seq47 134 3e-26 seq443 89.7 1e-12 seq31 87.8 4e-12 seq120 84.2 4e-11 >seq346 Length=431050 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| ||| || || | || || || || || ||||| || || || || | Sbjct 242990 TACCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 242931 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| || || |||||||||||||| || || || || || |||| Sbjct 242930 AAAGGGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAG 242871 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || |||||||| || ||||| ||||| || || | || || | Sbjct 242870 GGATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTGGGCTCCA 242811 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || |||| ||||| ||||| |||||||| Sbjct 242810 CCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 242762 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| ||||| || | ||| || || || || ||||| || || || |||| Sbjct 243446 TACCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 243387 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| || ||||||||||||||||| || | || || || |||| Sbjct 243386 AGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAG 243327 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || |||||||| || ||||| ||||| || || | || || | Sbjct 243326 GGATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCA 243267 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || |||| ||||| ||||| || ||||| Sbjct 243266 CCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| ||| || || | || || || || || ||||| || || || |||| Sbjct 243218 TACCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 243159 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| || || |||||||||||||| || || || || || |||| Sbjct 243158 AGAGGGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAG 243099 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || |||||||| || ||||| ||||| || || | || || | Sbjct 243098 GGATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCA 243039 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || |||| ||||| ||||| || ||||| Sbjct 243038 CCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 242990 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || | || || || || || || || || || || ||||| Sbjct 243672 CCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAG 243613 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || ||||||||||||||||| || | || || || ||||| Sbjct 243612 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243553 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| || || || || || || || || || || || | || || || Sbjct 243552 ATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACC 243493 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| |||| ||||| ||||| |||||||| Sbjct 243492 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 >seq47 Length=2045465 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | || || || || |||||||| || || ||||| || Sbjct 352077 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAG 352136 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||||||||| || || || || || || || Sbjct 352137 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 352196 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || || || ||||| || || |||| || || Sbjct 352197 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACC 352256 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| || || |||||||| Sbjct 352257 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352303 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | || || || || |||||||| || || || || || Sbjct 351849 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 351908 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||||||||| || || || || || || || Sbjct 351909 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 351968 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || ||||| ||||| || || | || || || Sbjct 351969 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACC 352028 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| || || |||||||| Sbjct 352029 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352075 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | || || || || |||||||| || || || || || Sbjct 352305 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 352364 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || || ||||||||||| || || || || || || || Sbjct 352365 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 352424 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || || || ||||| || || |||| || || Sbjct 352425 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTAGGCTCGACC 352484 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| || || |||||||| Sbjct 352485 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 352531 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| |||||| || | || || || || |||||||| || || || || || Sbjct 352533 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 352592 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| ||||| || ||||||||||| || || || || || || || Sbjct 352593 AGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 352652 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| || || || || ||||| || || | || || || Sbjct 352653 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACC 352712 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | || || ||||| |||||||| Sbjct 352713 TCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 352759 >seq443 Length=203837 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214 ||||||||||| || || ||||| | |||| ||| || || | |||||||| || ||| Sbjct 191591 TGGTGGTACTACATTTCCAAAGGAGTGGAATTCTTGGACACAATCTTTTTCATCCTGAGG 191532 Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274 || |||||||| ||||| || || | ||||| || || || | |||||||| | | Sbjct 191531 AAGAAGTTTAACCAGGTCAGCTTCCTCCACGTCTACCACCACTGCACTATGTTCATCCTC 191472 Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 | ||| | || ||||||||| | | || || |||| Sbjct 191471 TGGTGGATTGGAATTAAATGGGTCCCTGGTGGACAAG 191435 >seq31 Length=7233435 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 60147 GAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCA 60206 |||| |||||||||| | || || ||||| || || ||| | || || |||||||||| Sbjct 6689279 GAGCTCTATGGTGGTATTTCATCTCCAAAGGCATCGAGTACCTGGACACAGTGTTTTTCA 6689338 Query 60207 TACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGT 60266 | || |||||||| | || ||||||| ||| | || || || || || | || |||| Sbjct 6689339 TTCTGAGGAAAAAATGCAACCAGGTTACTTTCCTGCATGTCTACCACCACTGCACCATGT 6689398 Query 60267 TTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309 | || | | ||| | || || |||||| | || ||||| || Sbjct 6689399 TCACGCTGTGGTGGATCGGTATCAAATGGGTGGCAGGAGGACA 6689441 >seq120 Length=1226260 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || || ||||| || || ||||||||||| || || | || || || || Sbjct 477154 CCTTCCTTGTCCTGGATCTTAGCCTTGACATTTTCAATAGTGTCGCTGGGCTCAACCTCG 477095 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| |||||||||||||| || || |||||||| Sbjct 477094 AGGGTAATAGTCTTCCCTGTCAACGTCTTCACGAAGATCTGCAT 477051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981567782230858