Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq346 93.3 1e-13 seq47 89.7 1e-12 >seq346 Length=431050 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||||||||| ||||| ||| Sbjct 242765 CAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTTTGGAGGTGGAGCCCAGCGAC 242824 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||| || || || ||||| || || ||| || Sbjct 242825 ACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAGCAG 242884 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || ||||||||| |||||||||| | || | |||| |||||| || Sbjct 242885 AGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTACAACATC 242944 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || || ||||| Sbjct 242945 CAGAAGGAGTCCACCCTCCATCTTGT 242970 >seq47 Length=2045465 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| |||| || || | ||||| | || Sbjct 352288 AAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGCGACACCATTGAGAAC 352229 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || || || ||||| Sbjct 352228 GTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTT 352169 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | || | ||||||||||| ||||||||||||| Sbjct 352168 GCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAACATCCAGAAAGAGTCC 352109 Query 206365 ACTCTTCACCTTGT 206378 || || || ||||| Sbjct 352108 ACCCTCCATCTTGT 352095 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| |||| || || | ||||| | || Sbjct 352516 AAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCTAGCGACACCATTGAGAAC 352457 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || || || ||||| Sbjct 352456 GTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTT 352397 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | || | |||| |||||| ||||||||||||| Sbjct 352396 GCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAAGAGTCC 352337 Query 206365 ACTCTTCACCTTGT 206378 || || || ||||| Sbjct 352336 ACCCTCCATCTTGT 352323 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| || || || ||||| |||| || || ||| Sbjct 352756 CAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGAGCCCAGCGAC 352697 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || ||||| ||| || ||| || Sbjct 352696 ACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGCAG 352637 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || ||||| |||||||||| | || | |||| |||||| || Sbjct 352636 AGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTACAACATC 352577 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| || || || ||||| Sbjct 352576 CAGAAAGAGTCCACCCTCCATCTTGT 352551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181508540046862