Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq328 158 1e-33 seq346 100 3e-16 >seq328 Length=840127 Score = 158 bits (174), Expect = 1e-33 Identities = 944/1492 (63%), Gaps = 36/1492 (2%) Strand=Plus/Minus Query 146938 TTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTA 146997 ||||| ||| | | |||| |||||| || ||||| | || ||||| |||| || || Sbjct 221540 TTGCTGGTGTAGGCTTCAATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTG 221481 Query 146998 GGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAA 147057 ||||| |||| || || || | || |||| | ||| || ||||||| Sbjct 221480 GGCATTGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGC 221421 Query 147058 GTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCT 147117 || ||||||||||| | ||||||| ||||||||||||||| || | || Sbjct 221420 AGTTCCCAGTCCCACAGGCCGGTGGGCGTCTTCCCCCACATGTCGTACTGAAGGATGCCC 221361 Query 147118 CGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTCACA 147176 ||| | ||| ||| || | || |||| || || | | |||| ||||| Sbjct 221360 TTGCTGACAGGAGAGCCTTCGTAAGTCTCGTAGGGGCCAA-GCTCACCAGCCAGCTCACA 221302 Query 147177 GCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGA-CGGTCG 147235 ||| ||||| || ||| | ||||| || || || ||| || |||| || | | || | Sbjct 221301 GCTCGCCTCCAGGGCTGCGTAGTAGATAGTCTCAAAGATCTGGGTGTTCAGCAGCTGT-G 221243 Query 147236 CTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATAC 147295 | || || || | || ||||| || | |||||||| ||||||||||||| | Sbjct 221242 CCTCAGGACTTTCAAAGGGGTAACGCATCAGGATGAAGGCATCTGCCAAACCCTGGACTC 221183 Query 147296 CGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGC--TC-GCTATGGGATAGT 147352 ||| || || || | || || |||| |||| || || | || ||||||| Sbjct 221182 CGATTCCTATTGGCCTGTGACGTTTGTTGGA---CTTCTCGGCTTCAGGTACTGGATAGT 221126 Query 147353 GGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTT 147412 ||| || || ||| |||| | ||| || | |||||| || | | |||| Sbjct 221125 AGTTAATGTCGATGATCCTGTTCAAGTTTTTGACAATAACTTTGGTCACATATGCCAGTT 221066 Query 147413 TCTCGAAATCATAAGTCCCGTCTTCGACA-CGTACGCATTGGTTCACGGCGATAGACGCC 147471 | | ||| || || ||| || | | | ||| || ||| | ||||| || ||| Sbjct 221065 TTTTGAAGTCGTATGTCTGCTCAGGGGTAACATAC--AT--GTTGAGAGCGATGGAAGCC 221010 Query 147472 AGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG 147531 ||||| ||||| || ||| || | || |||| | || | ||| | ||| |||||| Sbjct 221009 AGATTACAGACCGCTACCTCATCTTTGCCGGTGTATTCGACAACTTCTGTGCAGAGGTTG 220950 Query 147532 CTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAG 147591 |||||||| ||| ||||| || ||||| ||||| ||||| ||||| ||||||||| | Sbjct 220949 CTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTAC 220890 Query 147592 AGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA--ACCTA-TGCAGGTCC 147648 |||||||| ||| || || || || | | |||||| | || ||| | | Sbjct 220889 AGCATGTATGGTGTACCAGTTTCTGTCTGGGACT---CGATAATGGCGTACCACAGCTGC 220833 Query 147649 TGCGCTCGCACCCGCTGCCGATAG---CGGCCCTCGTTTTCGTACCGCTCGTACAACCGC 147705 || || || || || || | | | ||||| ||||| || ||| | | Sbjct 220832 TGAGCCTTCA-CCACT--CGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGAGTTCC 220776 Query 147706 TCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGAC 147765 || ||||| || || |||| || | || || || |||| | ||||||||||| ||| Sbjct 220775 TCGAACTCCTCCCCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCAAAGAC 220716 Query 147766 CACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATA 147825 || | || | || | ||| |||| || || | ||||| || || | | Sbjct 220715 CAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCATAAAAA 220656 Query 147826 AGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTAT 147883 ||||| | || || ||| ||||| || |||| |||| | || | | | Sbjct 220655 AGATCTCTGGCCCTCTGC--TCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAA 220598 Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGC 147940 | | || ||||||||| || | ||| | ||| | || || | | || || | Sbjct 220597 ACACATCAAAGTGCCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGCCAC 220538 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 |||||||||||| || || ||||||| | || | || |||||| |||| || | | Sbjct 220537 CCTGGTCGACATAACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATTTG 220478 Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 | |||| |||||| | ||| | ||| || ||||| | | || || | Sbjct 220477 AATTGCCATTGGTGCCAGCGATGTAGCTCCCTGTGGCTCTGATACAGCTGACCGCCACAC 220418 Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119 | || || || |||| | || || ||| || || | || ||| || ||||| Sbjct 220417 CTATTCCTCCAGCCG-ATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATGCCC 220359 Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179 || |||||||||| || | | |||||| || || | | || || ||| Sbjct 220358 TCAATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGTTTGGTT 220299 Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239 || || ||||| || ||| || || || ||| | || | | || | || Sbjct 220298 CCTGCATTAAAAAGTGTAGGAGAGGCATGGGTGAACCACTTCTCTGAGAGCAGGTTGTAG 220239 Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299 |||||||| || | ||||| ||| ||||| || || ||| || | |||||||||| Sbjct 220238 GTCTCAATGGCTGCGTCGATATCGGTTCCGTGGATTCCATCCGCCACTCTCATGAGCATG 220179 Query 148300 TGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTT 148359 ||||| || || ||||| |||| ||||||||| || || || | || ||||| Sbjct 220178 TGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGACCTCTCCAGGGTC 220119 Query 148360 TTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCAT 148411 ||| | |||||| | ||||| |||||| |||||| |||||||| || Sbjct 220118 TTGAATCCAAAGAAGTTGTAGGAGAAATCTTTGTCGTAAATGATGGCCGAAT 220067 >seq346 Length=431050 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| || | | | ||||| || || ||||||||||| | |||||| | Sbjct 243432 CGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCA 243373 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| |||||||| || | | |||| |||||||| || || ||||| |||||||| ||| Sbjct 243372 TCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTA 243313 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| || | | || | || ||| | |||||||| || | || | Sbjct 243312 TCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATG 243253 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| ||||| || || | || || ||||| Sbjct 243252 GTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| ||||||||||| | |||||| |||||| |||||||| || | | Sbjct 243639 GACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTCCAGCTGTTTTCCAGCA 243580 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || ||||| |||||||| ||||| ||||| || | Sbjct 243579 AAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATTTTGGCCTTGACG 243520 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || || ||||| || || Sbjct 243519 TTCTCGATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTG 243460 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 243459 ACAAAGATCTGCAT 243446 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | |||||| |||||| ||||| || || | | Sbjct 242955 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCTTCCAGCTGCTTTCCAGCA 242896 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || ||||| |||||||| ||||| || ||| || | Sbjct 242895 AAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTTGCCTTAACA 242836 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || ||||||||||| || || Sbjct 242835 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTC 242776 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 242775 ACAAAGATCTGCAT 242762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476488341547920