Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq191 98.7 3e-17 seq89 98.7 3e-17 seq2 93.3 1e-15 >seq191 Length=915920 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | | Sbjct 442949 GCTGAAATAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTTGATC 442890 Query 2829 CCGGGCTTCAGC 2840 | ||| |||||| Sbjct 442889 CTGGGTTTCAGC 442878 >seq89 Length=1662256 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 457206 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 457147 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 457146 CCGGGTTTCGGC 457135 >seq2 Length=8873700 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6160609 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6160668 Query 2829 CCGG 2832 |||| Sbjct 6160669 CCGG 6160672 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6160828 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6160887 Query 2829 CCGG 2832 |||| Sbjct 6160888 CCGG 6160891 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6161047 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6161106 Query 2829 CCGG 2832 |||| Sbjct 6161107 CCGG 6161110 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6161266 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6161325 Query 2829 CCGG 2832 |||| Sbjct 6161326 CCGG 6161329 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6161485 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6161544 Query 2829 CCGG 2832 |||| Sbjct 6161545 CCGG 6161548 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6161704 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6161763 Query 2829 CCGG 2832 |||| Sbjct 6161764 CCGG 6161767 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6161923 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6161982 Query 2829 CCGG 2832 |||| Sbjct 6161983 CCGG 6161986 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6162090 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6162149 Query 2829 CCGG 2832 |||| Sbjct 6162150 CCGG 6162153 Score = 93.3 bits (102), Expect = 1e-15 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6162257 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6162316 Query 2829 CCGG 2832 |||| Sbjct 6162317 CCGG 6162320 Score = 84.2 bits (92), Expect = 7e-13 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2782 AGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||||||||| |||||||||||||||||||||||||||||| | |||||| ||| || Sbjct 6163222 AGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTTTCGGC 6163280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15846025073190