Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq328 556 2e-153 seq34 114 2e-20 >seq328 Length=840127 Score = 556 bits (616), Expect = 2e-153 Identities = 1301/1951 (67%), Gaps = 35/1951 (2%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| ||||| ||| |||||| |||||||| | || | || ||||| |||||| Sbjct 221642 TTCTTCATCTCCTCACTCCACAGGCCCCTCTCCGTCAGGTCTTTGAGCAGATGAGGATTA 221583 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || || || || || || || || |||||||| || || || ||||| || | ||| Sbjct 221582 ACGATCTGGAACTCTCCGGACAAGACCCTACGAGTATAGATGTTGCTGGTGTAGGCTTCA 221523 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | ||| || || || ||||| || || || || || || || ||||| || |||| || Sbjct 221522 ATAGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGCCAGCAGC 221463 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || || | ||| || || || || ||| ||| ||||| || Sbjct 221462 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGTTCCCAGTCCCACAGG 221403 Query 68893 TCAGATGGTACAACATTCCAAAGAT--CGTATTGTAGAATTCCGTTACTTGCATATGATC 68950 | | || | | | || | || |||| || || || || || || || || | Sbjct 221402 CCGGTGGG--CGTCTTCCCCCACATGTCGTACTGAAGGATGCCCTTGCTGACAGGAGAGC 221345 Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCAC 69010 | | || || || || || || || |||| || ||||| || ||||| | || Sbjct 221344 CTTCGTAAGTCTCGTAGGGGCCAAGCTCACCAGCCAGCTCACAGCTCGCCTCCAGGGCTG 221285 Query 69011 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG 69070 |||| || || || || || |||| | || || ||||| || |||| || || | Sbjct 221284 CGTAGTAGATAGTCTCAAAGATCTGGGTGTTCAGCAGCTGTGCCTCAGGACTTTCAAAGG 221225 Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 | ||| | | || || || ||||||||||| ||||| || || || || || || || | Sbjct 221224 GGTAACGCATCAGGATGAAGGCATCTGCCAAACCCTGGACTCCGATTCCTATTGGCCTGT 221165 Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190 | | || || || | || ||||| || | ||||| || ||||| || || || | | Sbjct 221164 GACGTTTGTTGGACTTCTCGGCTTCAGGTACTGGATAGTAGTTAATGTCGATGATCCTGT 221105 Query 69191 TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTC--- 69247 | | ||| ||| | ||||| ||| | ||||| || || || ||| Sbjct 221104 TCAAGTTTTTGACAATAACTTTGGTCACATATGCCAGTTTTTTGAAGTCGTAT-GTCTGC 221046 Query 69248 -CATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 || ||||| |||| || || || | || || |||||||| || |||||||||| Sbjct 221045 TCAGGGGTAACATACATGTTGAGAGCGATGGAAGCCAGATTACAGACCGCTACCTCATC- 220987 Query 69307 GAATTTGCA----TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAG 69362 ||||| |||| | | ||||| || || || || |||||||| || ||||| Sbjct 220986 ---TTTGCCGGTGTATTCGACAACTTCTGTGCAGAGGTTGCTGCATTTGATGGTTCCCAG 220930 Query 69363 ATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGT 69422 || ||||| || ||||| ||| |||||||| ||||| || || | || |||||||| Sbjct 220929 GTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATGTATGGTGTACCAGT 220870 Query 69423 TTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTA 69482 ||| |||| || |||||||| | | ||| | | ||| || | || || | | Sbjct 220869 TTCTGTCTGGGACTCGATAATGGCGTACCACAGCTGCTGAGCCTTCACCAC--TCGTTTG 220812 Query 69483 ACGCTTCTCT--TTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 || || | || |||||||||| || || || ||||| || || ||||| ||| Sbjct 220811 ACCCTCCCCTCCTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCCCCCCAGCACTCA 220752 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 |||| |||||| || || || ||||||||||| ||||| | | | || |||| Sbjct 220751 TCCAGTCCAGGGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTGCTCTCCACTCTC 220692 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 ||||| || | || || ||||| | || ||| |||||||||| || | || || Sbjct 220691 TTCATGAACAAGTCTGGGATCCACAAGGCATAAAAAAGATCTCTGGCCCTCTGCTCCTCC 220632 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || ||||| || || || || || || || || | | |||| | ||||| || || || Sbjct 220631 TTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTGCCAGGGCTCCAGG 220572 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | || |||| || || || ||||| || | || | || ||||| Sbjct 220571 TACATGGCGAAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATAACGTGCCGTGTTG 220512 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || || ||||||||||| || | | ||||| || || ||||| || |||| || || Sbjct 220511 TTGTATACTCTCAGCATGGGGACCAGCCCATTTGAATTGCCATTGGTGCCAGCGATGTAG 220452 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || ||| | || | ||| || | | | |||||||||||| ||| ||| ||||| Sbjct 220451 CTCCCTGTGGCTCTGATACAGCTGACCGCCACACCTATTCCTCCAGCCGATTTGGAGATG 220392 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 || ||||| | |||| |||||||||||| ||||| ||||| || || ||||| ||| Sbjct 220391 AGGGCACACTGCTTCAGTGTGTCATATATGCCCTCAATGCTGTCGTCCTTCATGGCAAGC 220332 Query 69961 AGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCG 70020 || || ||||| || | || | ||| | ||||| |||||||| | ||||||||| || Sbjct 220331 AGGAAGCAGCTGGATAGCTGTGGCTGTTTGGTTCCTGCATTAAAAAGTGTAGGAGAGGCA 220272 Query 70021 TGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCAC 70080 || |||||||| || || || ||||| ||||| || ||||| |||| || ||||| Sbjct 220271 TGGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCAATGGCTGCGTCGATATCGGTT 220212 Query 70081 TGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTA 70140 || ||||| ||| || | ||| | ||| ||||| || || || || ||| Sbjct 220211 CCGTGGATTCCATCCGCCACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCG 220152 Query 70141 TTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAG 70200 || || |||| |||||| || | ||||| || || || ||||| ||||||| || || Sbjct 220151 TTGATCTTCAGCAGGTAGGACCTCTCCAGGGTCTTGAATCCAAAGAAGTTGTAGGAGAAA 220092 Query 70201 TCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATA 70260 ||| | |||||||| || | ||||| || || || | | ||| || | | Sbjct 220091 TCTTTGTCGTAAATGATGGCCGAATTGAGGCGGTCTTTGTTCTCAAGAACAATGT---TG 220035 Query 70261 ACAGT---AGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTG 70314 | || ||||| |||||||| |||| ||| ||| || | |||||| Sbjct 220034 AGGGTTTCCTTGGAGATCATCGGAGAGTGACGTT---GATTCAGAGGGTTGATGTAGTTG 219978 Query 70315 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374 | | || ||||| || ||||| || | || ||||| || ||||| | ||||| | Sbjct 219977 TACAGGTCCTCCATCACGTCACTGAACACCTTCTTTGTCTCTTTGTGCAGGTTTGAAACC 219918 Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATT 70434 || |||| || || || || ||||||||||| |||| || || ||| || || || Sbjct 219917 GCGATTCGTGCAGCAAGGATGGCATAGTCAGGGTGTTTCGTTGTGAGAGTGGCGGCGATC 219858 Query 70435 TCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACT 70494 || || || | || || | || | || || || ||| | || | || || || || Sbjct 219857 TCTGCTGCCAGAGTGTCGAGCTCCACGGTGGTGACACCGCTGTACAAACCCTGGATCACC 219798 Query 70495 TTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT- 70553 ||||| | || | | || |||| || |||| |||||| | || || || ||||| Sbjct 219797 TTCATTGTAATCTGGGCTGGGTCTACAAAGTCTGAGTTCAGGCTGTAGCA-AAGTTTCTG 219739 Query 70554 AATACGAGATGTAATTTTATCAAACATAACA 70584 || ||||| || ||||| |||||||| ||| Sbjct 219738 GATGCGAGAGGTGATTTTGTCAAACATGACA 219708 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 68435 CTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATAT 68494 |||| |||| || |||| ||||| || || |||||| ||| |||| || || || | Sbjct 222376 CTAGTTTCCAGCCAAAGAAGTGCATGCTGGTCAGTTTGCCATAGTTTGGCTCTGCGATGT 222317 Query 68495 GAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAA 68554 | || |||| || || || || || |||||||| || | || || ||||| || | | Sbjct 222316 GGATGTTCAGAGACTGGCTCTGGTCAATGAAAGCACCACGGTCGGCGGCCATCTTGAGTA 222257 Query 68555 TACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 |||| || | |||||||| | ||| ||| | | ||| || | ||||||||||| Sbjct 222256 CTGTCTTCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCATCTGGAA 222200 >seq34 Length=6032531 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| || || || | ||||| || | || || || |||||||| || | ||||| Sbjct 778803 CCTCATCCCTGCTGATCAGCTCGTTGGAGTAGGTAAGACCGGGCATTAGGCCCCTCTTTT 778744 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 |||||||| | || |||||||| || ||||| |||||||||||||| || |||||||| | Sbjct 778743 TGAGCCAATAGATAGCAGCAAATGAGCCAGAGAAGAAGATGCCTTCCACAGCTGCAAAAG 778684 Query 39759 CAACAAGTCTCTCTCC 39774 | |||| || ||| || Sbjct 778683 CCACAATTCGCTCCCC 778668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686731732084080