Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq431 114 1e-20 seq51 100 2e-16 seq405 91.5 1e-13 >seq431 Length=212699 Score = 114 bits (126), Expect = 1e-20 Identities = 103/127 (81%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGA- 77369 ||||||||||||||||||| || ||| |||||||||| |||||| || ||||||| Sbjct 96327 CCAGACAACCTCCAGCTCCGCGTTCAGTCTATCCAGCTTCACAAAGTCGTCTTTGTTGAT 96386 Query 77370 CAACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAG 77429 || |||| ||||| | |||||||||| | ||| ||||||||||||| | |||||| | Sbjct 96387 CACCTGA-CCTCCAGATTTCAGCCTCCAGTCATTCAGCTTCCAGTTCTTTATCCACTTGG 96445 Query 77430 TCACACC 77436 ||||||| Sbjct 96446 TCACACC 96452 Score = 105 bits (116), Expect = 5e-18 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 77434 ACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTG 77493 |||||||||||||||| |||||| ||||||| ||||||||||||||| || ||||| | Sbjct 96599 ACCATTGATGGTGAACTGGCTGTCAGTGTAGAGGACCAGCTTCTTGATGTTCTTCTCTTT 96658 Query 77494 AGCTTGTTGCAGTGCTTTGGATGCAGCCTGG 77524 ||||||| |||||||||| | || |||||| Sbjct 96659 GGCTTGTTCCAGTGCTTTGCAGGCTGCCTGG 96689 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 77865 CTCTGACAAACGCCCAGGCATCTTGCTCTGTTGCAAACTTCTTAAATACGGCTGCTGGGA 77924 |||||||||| ||||||||||| ||||| |||||||||||| || ||| | ||| | Sbjct 98304 CTCTGACAAAGGCCCAGGCATCCCTCTCTGATGCAAACTTCTTGAAAGAGGCAGATGGAA 98363 Query 77925 ATTTGTCTACTTGGCTCTTACATTCATCCC 77954 |||| || || ||||||||||||||||||| Sbjct 98364 ATTTCTCCACCTGGCTCTTACATTCATCCC 98393 >seq51 Length=7210046 Score = 100 bits (110), Expect = 2e-16 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 87328 CCTGCTCCCAGTTTACTAAAATCTTTCTTAGATTGAAATGTATAGACTGTCAAGCCAGCA 87387 |||||||||| ||| || || ||| |||| || || ||||| || |||||| |||||| Sbjct 6294994 CCTGCTCCCATTTTGCTGAAGTCTCTCTTGGACTGGAATGTGTAAGCTGTCAGTCCAGCA 6294935 Query 87388 AACACAGCACATGTTaaaaaaaGCGATTGTAGTATGGTGGAGTATTCATAGAAGGTCA 87445 ||||| ||||| || | || | | |||||||| ||||||||||||||||| |||| Sbjct 6294934 AACACGGCACAGGTCAGGAACAAGGCTTGTAGTACAGTGGAGTATTCATAGAAAGTCA 6294877 >seq405 Length=505804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| |||| || || ||| | || ||||| ||||| || |||| || || || Sbjct 89528 ATGGCTCTGCCTCCCTGCCATGCCCTGTGCCAGTTCTACGTGTGTGATGGCGAGCTTTCT 89469 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 ||||| |||| || | || ||||| ||||| || ||||| || || ||||| || || Sbjct 89468 TGTCAGCTGTACCAGCGCTCGGGTGATATGGGCCTTGGGGTGCCATTCAACATCGCCAGC 89409 Query 41169 TATGCTCTGCTCACGTATATGATTGCACAC 41198 ||||| || || || || |||||||||||| Sbjct 89408 TATGCACTTCTTACCTACATGATTGCACAC 89379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397356107135110