Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq328 196 6e-45
seq34 89.7 6e-13
seq1512 86.0 7e-12
seq334 86.0 7e-12
>seq328
Length=840127
Score = 196 bits (216), Expect = 6e-45
Identities = 840/1304 (64%), Gaps = 38/1304 (3%)
Strand=Plus/Plus
Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCC-CAAATGTCCA 104372
||||| || || | || || || || ||||| || || | || | || || | ||||
Sbjct 220263 GTTCACCCATGCCTCTCCTACACTTTTTAATGCAGGAAC-CAAACAGCCACAGCTATCCA 220321
Query 104373 GTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGG 104432
| |||||||| | |||| ||||| ||| || | || || |||| || || | |
Sbjct 220322 GCTGCTTCCTGCTTGCCATGAAGGACGACAGCATTGAGGGCATATATGACACACTGAAGC 220381
Query 104433 AGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAG 104492
||||||| | ||||| || | |||||| || || || || || | | ||||
Sbjct 220382 AGTGTGCCCTCATCTCCAAATCGGCTGGAGGAATAGGTGTGGCGGTCAGCTGTATCAGAG 220441
Query 104493 CCA-ATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 104551
||| | | || || || || ||||| | ||| |||| | | || |||||
Sbjct 220442 CCACAGGGAGCTAC-ATCGCTGGCACCAATGGCAATTCAAATGGGCTGGTCCCCATGCTG 220500
Query 104552 CGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATC 104607
| |||| ||| ||| || || ||||| | || | ||| | | | || || |
Sbjct 220501 AGAGTATACAACAACACGGCACGTTATGTCGACCAGGGTGG-CAACAAGAGACCCGGCGC 220559
Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 104667
| |||| | || || ||||| |||||| ||| | | || ||||| ||| ||
Sbjct 220560 TTTCGCCATGTACCTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGGAGCTGAAGAA 220619
Query 104668 CAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 104727
||| ||| | |||||| | || | | ||||| || | || | ||||| |||||
Sbjct 220620 GAACACAGGGAAGGAGGAGCAGAGGGCCAGAGATCTTTTTTATGCCTTGTGGATCCCAGA 220679
Query 104728 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACAA 104784
| |||||||||||||| |||||| | | |||||| | | ||||| || |
Sbjct 220680 CTTGTTCATGAAGAGAGT---GGAGAGCAACCAAGACTGGTCTTTGATGTGTCCGAACGA 220736
Query 104785 GGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACG 104843
| ||||| || || ||| | ||| |||||||| || | || ||||| || || |
Sbjct 220737 GTGCCCTGGACTGGATGAGTGCTGGGGG-GAGGAGTTCGAGGAACTCTACACCAAATATG 220795
Query 104844 AGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTC 104902
| | || || ||| | ||| |||| ||| | ||||| | || ||| ||
Sbjct 220796 AAAAGGAGGGGAGGGTCAAA-CGAGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATTATC 220854
Query 104903 AAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAG 104962
|||| || || || |||||||||||||||||||| |||||||||||||| |||| |||
Sbjct 220855 GAGTCCCAGACAGAAACTGGTACACCATACATGCTGTACAAAGACGCCTGCAACCGGAAG 220914
Query 104963 AGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022
|| || || |||| |||| ||||| | ||| ||||| |||||| | | |||
Sbjct 220915 AGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTCTGCACAGAAGTTGTCGAA 220974
Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082
| || | |||||||||| || || ||||| || || || ||||||||| || ||||
Sbjct 220975 TACACCGGCAAAGATGAGGTAGCGGTCTGTAATCTGGCTTCCATCGCTCTCAACATGTAT 221034
Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142
|| || ||| |||||| || | ||||||| | || || ||| | |
Sbjct 221035 GTTACCCCTGAG---CAGACATACGACTTCAAAAAACTGGCATATGTGACCAAAGTTATT 221091
Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGT 105199
||||||| | ||||| | || || | || | || || || ||| ||
Sbjct 221092 GTCAAAAACTTGAACAGGATCATCGACATTAACTACTATCCAGTACCTGA---AGCCGAG 221148
Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259
|| || || | | ||| | ||||| || |||| || |||||| | || |||| |||
Sbjct 221149 AAGTCCAACAAACGTCACAGGCCAATAGGAATCGGAGTCCAGGGTTTGGCAGATGCCTTC 221208
Query 105260 ATTCTTTGTCGCCACGCATTTG--ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATAT 105317
|| || || || | |||| | ||| || || || | || | | || |
Sbjct 221209 ATCCTGATGCGTTACCCCTTTGAAAGTCC--TGAGGCACAGCTGCTGAACACCCAGATCT 221266
Query 105318 TTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTC 105377
||||||| || || |||| || || |||||||| | ||| |||| | | ||| |
Sbjct 221267 TTGAGACTATCTACTACGCAGCCCTGGAGGCGAGCTGTGAGCTGGCTGGTGAGCTTGGCC 221326
Query 105378 CATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATATGTG 105435
| || || || | || || ||||| | ||| |||||| | ||||| | || |||||
Sbjct 221327 CCTACGAGACTTACGAAGGCTCTCCTG--TCAGCAAGGGCATCCTTCAGTACGACATGTG 221384
Query 105436 GGAAGGTGA-GACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGA 105494
|| | || | ||| | | ||||||||| || ||||| ||| ||
Sbjct 221385 GG-GGAAGACGCCCACCGGCCTGTGGGACTGGGAACTGCTGAAGGAGAAGATCGCCAAGC 221443
Query 105495 AGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCT 105554
| || | | ||||| || || |||| |||||||| || ||||||||||| || |||
Sbjct 221444 ACGGCGTGAGGAACAGCCTGCTGCTGGCCCCAATGCCCACGGCCTCCACCGCCCAGATCC 221503
Query 105555 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTAT 105598
|||| || || || | ||||| ||||||| | |||||||||
Sbjct 221504 TGGGCAACAACGAGTCTATTGAAGCCTACACCAGCAACATCTAT 221547
>seq34
Length=6032531
Score = 89.7 bits (98), Expect = 6e-13
Identities = 94/121 (78%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GC 94862
|||||| | | || ||||| ||| || || |||||||||||||| || || ||| ||
Sbjct 778671 GAGCGAATTGTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGCTCATT-TGCTGC 778729
Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922
||| ||||||||||| ||| | || || ||||| ||||| || |||||||||||| ||
Sbjct 778730 TATCTATTGGCTCAAAAAGAGGGGCCTAATGCCCGGTCTTACCTACTCCAACGAGCTGAT 778789
Query 94923 C 94923
|
Sbjct 778790 C 778790
>seq1512
Length=3299
Score = 86.0 bits (94), Expect = 7e-12
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| ||||| |||||||||||||| |||||| || || | ||||| |||||| ||||
Sbjct 320 GTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCTGGCTGAAGAAGAGAGGC 261
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG-GACT 94940
|| ||||| || || ||||||||||||||| ||| | ||||||| ||||
Sbjct 260 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGGTGACT 207
>seq334
Length=631087
Score = 86.0 bits (94), Expect = 7e-12
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| ||||| |||||||||||||| |||||| || || | ||||| |||||| ||||
Sbjct 411913 GTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCTGGCTGAAGAAGAGAGGC 411854
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG-GACT 94940
|| ||||| || || ||||||||||||||| ||| | ||||||| ||||
Sbjct 411853 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGGTGACT 411800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583110449947280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |