Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq328 188 8e-43 seq34 105 7e-18 seq1512 104 3e-17 seq334 104 3e-17 >seq328 Length=840127 Score = 188 bits (208), Expect = 8e-43 Identities = 533/812 (66%), Gaps = 10/812 (1%) Strand=Plus/Minus Query 79129 TTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATG 79188 |||||||| || | ||||| ||||||||||||| ||| |||||||| ||||| |||| Sbjct 220943 TTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGCGTCTTTGTACAGCATG 220884 Query 79189 TACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGG 79248 || || || || || || ||| || || || | ||| ||| | | | | ||| Sbjct 220883 TATGGTGTACCAGTTTCTGTCTGGGACTCGATAATGGCGTACCACAGCTGCTGAGCCTTC 220824 Query 79249 ACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCC 79308 || || ||| || |||| | || | ||| | || | ||| ||||| Sbjct 220823 ACCACTCGTTTGACCCTCCCCTCCTTTTCATATTTGGTGTAGAGTTCCTCGAACTCCTCC 220764 Query 79309 CCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCC 79368 || || || ||| || |||||||||| ||| ||||||| |||||| | || Sbjct 220763 CCCCAGCACTCATCCAGTCCAGGGCACTCGTTCGGACACATCAAAGACCAGTCTTGGTTG 220704 Query 79369 TTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAA 79428 |||| || ||| |||||| | ||| |||||||||| ||| || || || | | Sbjct 220703 CTCTCCACTCTCTTCATGAACAAGTCTGGGATCCACAAGGCATAAAAAAGATCTCTGGCC 220644 Query 79429 CGCATCTCCTCGTCGCCCTG-GTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTG 79487 | | |||||| | ||||| |||| |||||| || ||||| | | || ||| Sbjct 220643 CTCTGCTCCTCCTT-CCCTGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCAAAGTG 220585 Query 79488 CCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTA 79547 ||| |||||||| || |||||||| | || | |||| ||| ||||||| ||| || Sbjct 220584 CCAGGGCTCCAGGTACATGGCGAAAGCGCCGGGTCTCTTGTTGCCACCCTGGTCGACATA 220525 Query 79548 CCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGT 79607 || |||||||||||| | |||| |||||||| || | || | | ||| || || Sbjct 220524 ACGTGCCGTGTTGTTGTATACTCTCAGCATGGGGACCAGCCCATTTGAATTGCCATTGGT 220465 Query 79608 CCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAG---TGGATTCCGATGCCCCC 79664 || ||| | || | || | || | ||| | | || || || || Sbjct 220464 GCCAGCGATGTAGCTCCCTGTGGCTC---TGATACAGCTGACCGCCACACCTATTCCTCC 220408 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | | | ||||||||| | || |||| ||| || || || || |||||||| || ||| Sbjct 220407 AGCCGATTTGGAGATGAGGGCACACTGCTTCAGTGTGTCATATATGCCCTCAATGCTGTC 220348 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| || | |||||||||||| || | |||||| | || || || || || || Sbjct 220347 GTCCTTCATGGCAAGCAGGAAGCAGCTGGATAGCTGTGGCTGTTTGGTTCCTGCATTAAA 220288 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || || || | || || ||||| |||| | | ||| | ||| ||||| || | Sbjct 220287 AAGTGTAGGAGAGGCATGGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCAATGGC 220228 Query 79845 -GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCG 79903 ||| || ||| |||||||| || |||| || | ||||| | || ||| ||| Sbjct 220227 TGCG-TCGATATCGGTTCCGTGGATTCCATCCGCCACTCTCATGAGCATGTGCTGCGGCC 220169 Query 79904 TCTCGCCGACATTCAGGTAGCCCTTCTGCAGG 79935 |||| | || || || | |||| ||||| Sbjct 220168 GCTCGGCCACTTTGCCGTTGATCTTCAGCAGG 220137 Score = 163 bits (180), Expect = 3e-35 Identities = 411/620 (66%), Gaps = 16/620 (3%) Strand=Plus/Plus Query 19069 CCTGCAGAAGGGCTACCTCAACGAGGGTGAGACGCCTCAGTACCTTTTCATGCGAGTCGC 19128 ||||| |||| | || ||| | || ||| ||| ||| || | ||||| |||| || Sbjct 220137 CCTGCTGAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGAGTGGC 220196 Query 19129 GGTCGGCATCCATGGCGACGACCTCC-CGCGAGTCCGCGAGACATACGACCTGATGAGCC 19187 || || ||||| || ||| || ||| || | ||||| ||| ||||| | Sbjct 220197 GGATGGAATCCACGGAACCGATATCGACGC-AGCCATTGAGACCTACAACCTGCTCTCAG 220255 Query 19188 AGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGA 19247 |||||| ||||| || || | || || ||||| || || || || || | || ||| Sbjct 220256 AGAAGTGGTTCACCCATGCCTCTCCTACACTTTTTAATGCAGGAACCAAACAGCCACAGC 220315 Query 19248 TGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGC 19307 | || ||||| ||||| | || |||||||| ||||||||||||||||| || || || | Sbjct 220316 TATCCAGCTGCTTCCTGCTTGCCATGAAGGACGACAGCATTGAGGGCATATATGACACAC 220375 Query 19308 TCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG------GATCCACTGCT 19361 | ||| |||| || | ||||||||| | | | || || || || | || ||| Sbjct 220376 TGAAGCAGTGTGCCCTCATCTCCAAATCGGCTGGAGGAATAGGTGTGGCGGTCAGCTG-- 220433 Query 19362 CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCG 19421 |||| | | | || | ||| ||| || || || | | || | | Sbjct 220434 ----TATCAGAGCCACAGGGAGCTACATCGCTGGCACCAATGGCAATTCAAATGGGCTGG 220489 Query 19422 TCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAAC 19481 |||| ||||| | || | |||||||||||| | || ||| ||||||| ||| ||| Sbjct 220490 TCCCCATGCTGAGAGTATACAACAACACGGCACGTTATGTCGACCAGGGTGGCAACAAGA 220549 Query 19482 GCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCG 19541 | ||| | |||||||| ||||| ||||| |||||| || || | || ||||| | Sbjct 220550 GACCCGGCGCTTTCGCCATGTACCTGGAGCCCTGGCACTTTGATGTGTTTGACTTCCTGG 220609 Query 19542 AACTGCGCCTGAAC-CAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTG 19600 | ||| |||| ||||| | |||||| | | | || || || |||||| Sbjct 220610 AGCTGAAGAAGAACACAGGG-AAGGAGGAGCAGAGGGCCAGAGATCTTTTTTATGCCTTG 220668 Query 19601 TGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGC 19660 ||||| || ||| | |||||| ||| || |||| || |||| ||| ||||||| Sbjct 220669 TGGATCCCAGACTTGTTCATGAAGAGAGTGGAGAGCAACCAAGACTGGTCTTTGATGTGT 220728 Query 19661 CCGCACGAATGCCCTGGCCT 19680 ||| |||| |||||||| || Sbjct 220729 CCGAACGAGTGCCCTGGACT 220748 >seq34 Length=6032531 Score = 105 bits (116), Expect = 7e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 ||||||||| |||||||| ||||||||||||||||| || |||||| | |||||| Sbjct 778683 GCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGCTCATTTGCTGCTATCTATTGGCTC 778742 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 |||||| | ||||| ||||| || || | | ||||||||||||||| | |||| ||| Sbjct 778743 AAAAAGAGGGGCCTAATGCCCGGTCTTACCTACTCCAACGAGCTGATCAGCAGGGATGAG 778802 Query 60111 G 60111 | Sbjct 778803 G 778803 >seq1512 Length=3299 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 |||||| ||||||||||||||||| || ||| ||| || |||||||| || ||| | || Sbjct 321 CGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCTGGCTGAAGAAGAGAGG 262 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 ||| ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 261 CCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 212 >seq334 Length=631087 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 |||||| ||||||||||||||||| || ||| ||| || |||||||| || ||| | || Sbjct 411914 CGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCGATCTTCTGGCTGAAGAAGAGAGG 411855 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 ||| ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 411854 CCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 411805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60339 GTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTT 60398 ||| | ||||| ||||||| ||||||| |||||| |||| || ||||||||||||||| Sbjct 410879 GTGGAGAACCCCTTCGACTTCATGGAGAACATCTCTCTGGAGGGAAAGACCAACTTCTTT 410820 Query 60399 GAGAAGCGGGTCGGGGATTA 60418 |||||||| || || || || Sbjct 410819 GAGAAGCGTGTGGGCGAGTA 410800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548383404019680