Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq405 143 2e-29 seq40 109 4e-19 >seq405 Length=505804 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| || || || | |||||||||||||| || || Sbjct 89368 AGTCCTGTGATGTGTGCAATCATGTAGGTAAGAAGTGCATAGCTGGCGATGTTGAATGGC 89427 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 ||||| || ||||| || ||||| | |||||| |||||||| || ||||| || || | | Sbjct 89428 ACCCCAAGGCCCATATCACCCGAGCGCTGGTACAGCTGACAAGAAAGCTCGCCATCACAC 89487 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 ||||| ||||| |||| ||| ||||| ||||| |||||||| || Sbjct 89488 ACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGAGCCATAAG 89531 Score = 136 bits (150), Expect = 3e-27 Identities = 136/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||| ||||||||||| || || |||||||||||||| || ||||| ||||||||||| Sbjct 92352 CATGTTTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTC 92411 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 ||||||||||||| ||| || |||||| ||||| | || || ||||| || Sbjct 92412 GCCCTCTTCCCTGTCTGTGAACCCAAGACTGTCCAGGAAGTCCCGTGATCCATTGGCATC 92471 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30396 ||| ||||| || || |||| |||||||| |||| ||||| || |||| |||| Sbjct 92472 CCAAATCTTCACACCTTTCTTGGAGAGCTCCTTGGCATTTGTTGATCCCTATGAC 92526 >seq40 Length=6890715 Score = 109 bits (120), Expect = 4e-19 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 110406 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 110465 ||||||||||||||| | ||| ||||||||| |||||||||| | ||| || || ||||| Sbjct 4743263 CTCCCTGCTGAGGACAATGTTGATCCTGTCTTTCAGAGGTCTGTGCTTCTCTGGAATGGA 4743322 Query 110466 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||| |||||||| ||||| | ||||| ||||| |||||| Sbjct 4743323 AAACCACGTCTTTCTGCCCATGAGTACCACATTCTGTTTGCCT 4743365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406208281753224