Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq346 100 2e-16 >seq346 Length=431050 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||| | ||| || ||| ||| ||||| || || || || | || || || | || || Sbjct 243655 CACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCTTC 243596 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||||| || ||||| || |||||||||||||| | || | || || || ||| Sbjct 243595 CAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTG 243536 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| |||| || | | || ||||| | |||||| |||| ||||| | || Sbjct 243535 GATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTT 243476 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || |||||||| ||||| Sbjct 243475 GCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | || || |||| || || ||| ||| || || || || || || | Sbjct 243444 CCTCCTCTCAGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243385 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || |||||||| || ||||| || |||||||||||||| | || Sbjct 243384 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243325 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || || || ||| ||| || || | || | | || ||||| | |||||| Sbjct 243324 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243265 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || ||||| || || |||||||||||||| Sbjct 243264 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | || | ||| | ||| || ||| ||| || || || || || || | Sbjct 243216 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 243157 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| || || ||||| || || | ||||||||| | || Sbjct 243156 AGGGTACGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 243097 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || || || ||| ||| || || | || | | || ||||| | |||||| Sbjct 243096 ATGCCTTCCTTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACC 243037 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || ||||| || || |||||||||||||| Sbjct 243036 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 242990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429437642035886