Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq405 138 9e-28 seq40 100 2e-16 >seq405 Length=505804 Score = 138 bits (152), Expect = 9e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| || || || | |||||||||||||| || ||| Sbjct 89368 AGTCCTGTGATGTGTGCAATCATGTAGGTAAGAAGTGCATAGCTGGCGATGTTGAATGGC 89427 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 ||||| || ||||| || || || | |||||| ||||| || || ||||| || || | | Sbjct 89428 ACCCCAAGGCCCATATCACCCGAGCGCTGGTACAGCTGACAAGAAAGCTCGCCATCACAC 89487 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 ||||| ||||| |||| ||||||||| ||||| || ||||| || Sbjct 89488 ACGTAGAACTGGCACAGGGCATGGCAGGGAGGCAGAGCCATAAG 89531 Score = 120 bits (132), Expect = 2e-22 Identities = 119/153 (78%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||||||||| || ||||| ||||||||||| ||||||||||||| ||| Sbjct 92374 AAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCGCCCTCTTCCCTGTCTGTGAAC 92433 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||| ||||| | || || ||||| ||||| ||||| || || |||| | Sbjct 92434 CCAAGACTGTCCAGGAAGTCCCGTGATCCATTGGCATCCCAAATCTTCACACCTTTCTTG 92493 Query 30137 GAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30168 |||||||| |||| ||||| || |||| |||| Sbjct 92494 GAGAGCTCCTTGGCATTTGTTGATCCCTATGAC 92526 >seq40 Length=6890715 Score = 100 bits (110), Expect = 2e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||||||||||||||| | ||| | ||||||| |||||||||| | ||| || || ||||| Sbjct 4743263 CTCCCTGCTGAGGACAATGTTGATCCTGTCTTTCAGAGGTCTGTGCTTCTCTGGAATGGA 4743322 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||| |||||||| ||||| | ||||| ||||| || ||| Sbjct 4743323 AAACCACGTCTTTCTGCCCATGAGTACCACATTCTGTTTGCCT 4743365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406061118749092