Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17]
20,622 sequences; 684,144,148 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq346 152 1e-31
seq47 145 2e-29
>seq346
Length=431050
Score = 152 bits (168), Expect = 1e-31
Identities = 160/209 (77%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980
|| || || || || || || || || || || |||||||| |||||||| ||||
Sbjct 243449 CAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCAAGC--- 243505
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct 243506 GACACCATCGAGAACGTCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243565
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || || ||||| || ||||||||||| |||||||| | || || | || || |||
Sbjct 243566 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243625
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||||| || || || || ||||||||
Sbjct 243626 ATCCAAAAGGAGTCCACCCTCCATCTTGT 243654
Score = 145 bits (160), Expect = 2e-29
Identities = 166/222 (75%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980
||||| || || || || || || || || || |||||||| |||||||| ||||
Sbjct 243221 CAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC--- 243277
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||| ||||| || || |||||| ||||| || ||||| |||||||| ||||||
Sbjct 243278 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243337
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || || ||||| || ||||||||||| |||||||| | || || | || || |||
Sbjct 243338 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243397
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || || || || || ||| | || |||
Sbjct 243398 ATCCAGAAGGAGTCCACCCTCCACCTGGTCTTGCGTCTGAGA 243439
>seq47
Length=2045465
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || || || |||||||| ||||| || || ||
Sbjct 352300 CAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCTAGCG 352243
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||| ||||| || || || |||||||
Sbjct 352242 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352183
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | || || ||||||| |||
Sbjct 352182 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAACA 352123
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || || ||||||||
Sbjct 352122 TCCAGAAAGAGTCCACCCTCCATCTTGT 352095
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| ||||| || || || |||||||| ||||| || || |||
Sbjct 352756 CAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 352699
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||| ||||| || || || |||||||
Sbjct 352698 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352639
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || || || |||||||| | || || |||| || |||
Sbjct 352638 AGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTACAACA 352579
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || || ||||||||
Sbjct 352578 TCCAGAAAGAGTCCACCCTCCATCTTGT 352551
Score = 140 bits (154), Expect = 8e-28
Identities = 157/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || ||||| || || || |||||||| ||||| || || ||
Sbjct 352528 CAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCTAGCG 352471
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||| ||||| || || || |||||||
Sbjct 352470 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352411
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| |||||||| | || || |||| || |||
Sbjct 352410 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACA 352351
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || || ||||||||
Sbjct 352350 TCCAGAAAGAGTCCACCCTCCATCTTGT 352323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203413150894668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |