Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq346 152 1e-31 seq47 145 2e-29 >seq346 Length=431050 Score = 152 bits (168), Expect = 1e-31 Identities = 160/209 (77%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || || || || || || || || || || |||||||| |||||||| |||| Sbjct 243449 CAGATCTTTGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCAAGC--- 243505 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||||||||||||||| || || ||||| || ||||| |||||||| |||||| Sbjct 243506 GACACCATCGAGAACGTCAAGGCCAAAATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243565 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || ||||||||||| |||||||| | || || | || || ||| Sbjct 243566 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243625 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||||| || || || || |||||||| Sbjct 243626 ATCCAAAAGGAGTCCACCCTCCATCTTGT 243654 Score = 145 bits (160), Expect = 2e-29 Identities = 166/222 (75%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 ||||| || || || || || || || || || |||||||| |||||||| |||| Sbjct 243221 CAAATCTTTGTCAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCAAGC--- 243277 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| ||||| || || |||||| ||||| || ||||| |||||||| |||||| Sbjct 243278 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 243337 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || ||||||||||| |||||||| | || || | || || ||| Sbjct 243338 CAGCGTCTCATCTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTCTCTGACTACAAC 243397 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || || || || || ||| | || ||| Sbjct 243398 ATCCAGAAGGAGTCCACCCTCCACCTGGTCTTGCGTCTGAGA 243439 >seq47 Length=2045465 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || ||||| || || || |||||||| ||||| || || || Sbjct 352300 CAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCTAGCG 352243 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || || || ||||||| Sbjct 352242 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352183 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || ||||||| ||| Sbjct 352182 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGATTACAACA 352123 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || || |||||||| Sbjct 352122 TCCAGAAAGAGTCCACCCTCCATCTTGT 352095 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || |||||||| ||||| || || || |||||||| ||||| || || ||| Sbjct 352756 CAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 352699 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || || || ||||||| Sbjct 352698 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352639 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || || || |||||||| | || || |||| || ||| Sbjct 352638 AGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTCTCCGACTACAACA 352579 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || || |||||||| Sbjct 352578 TCCAGAAAGAGTCCACCCTCCATCTTGT 352551 Score = 140 bits (154), Expect = 8e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || ||||| || || || |||||||| ||||| || || || Sbjct 352528 CAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTCGA--GCCTAGCG 352471 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || || || ||||||| Sbjct 352470 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 352411 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || |||| || ||| Sbjct 352410 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACA 352351 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || || |||||||| Sbjct 352350 TCCAGAAAGAGTCCACCCTCCATCTTGT 352323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203413150894668