Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monopterus_20albus_20[refseq_20GCF_5F001952655.1_202017-01-17] 20,622 sequences; 684,144,148 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq47 140 3e-28 seq346 132 4e-26 >seq47 Length=2045465 Score = 140 bits (154), Expect = 3e-28 Identities = 166/223 (74%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||| ||||| ||||| ||||||||||||||||| Sbjct 352314 AGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 352373 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||| Sbjct 352374 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 352433 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820 |||||| ||| || ||| |||| | || |||||||| | ||| ||||||| Sbjct 352434 TTGTCCTGGATCTTAGCCTT----GACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAG 352489 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || || ||||| ||||| ||||||||| Sbjct 352490 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 352532 Score = 138 bits (152), Expect = 1e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||| ||||| ||||| ||||||||||||||||| Sbjct 351858 AGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 351917 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||| Sbjct 351918 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 351977 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||| || ||| | | | |||||||| | ||| ||||||| || Sbjct 351978 TTGTCCTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTG 352037 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || ||||| ||||| ||||||||| Sbjct 352038 ATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 352076 Score = 134 bits (148), Expect = 1e-26 Identities = 165/223 (74%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||| ||||| ||||| || |||||||||||||| Sbjct 352086 AGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGAGAGGGTGCGG 352145 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| ||||| | ||||| || ||| Sbjct 352146 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 352205 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820 |||||| ||| || ||| |||| | || |||||||| | ||| ||||||| Sbjct 352206 TTGTCCTGGATCTTAGCCTT----GACGTTCTCAATGGTGTCGCTAGGCTCGACCTCCAG 352261 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || || ||||| ||||| ||||||||| Sbjct 352262 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCATG 352304 Score = 129 bits (142), Expect = 5e-25 Identities = 165/225 (73%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||| ||||| ||||| ||||||||||||||||| Sbjct 352542 AGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 352601 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || || |||||||| || || ||||| | ||| ||||| | ||||| || ||| Sbjct 352602 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 352661 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCAC 41820 |||||| ||| || ||| |||| | || |||||||| | ||| ||||||| Sbjct 352662 TTGTCCTGGATCTTAGCCTT----GACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAG 352717 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || || || || || || || || ||||||||||| Sbjct 352718 GGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 352762 >seq346 Length=431050 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||| ||||| || ||| ||||||||| ||||| |||||||| ||||| || Sbjct 242979 AGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGG 242920 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || ||||| | ||| ||||| | || | || ||| Sbjct 242919 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 242860 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| ||| ||| | | | |||||||| | ||||||||||| || Sbjct 242859 TTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAAAGTG 242800 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || ||||| ||||| ||||| || || |||||||| || Sbjct 242799 ATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 242759 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||| ||||| || ||| ||||||||| ||||| ||||| |||||||| || Sbjct 243207 AGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGG 243148 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || ||||| | ||| ||||| | || | || ||| Sbjct 243147 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 243088 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| ||| ||| | | | |||||||| | ||||||||||| || Sbjct 243087 TTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTG 243028 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| ||||| || || || ||||| Sbjct 243027 ATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 242990 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| || ||||| || || ||| ||||||||| ||||| ||||| |||||||| || Sbjct 243435 AGACGCAAGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGG 243376 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||| || || || || || || ||||| ||||| | || | || ||| Sbjct 243375 CCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATGCCTTCC 243316 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| ||| ||| | | | |||||||| | ||||||||||| || Sbjct 243315 TTATCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTG 243256 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| ||||| || || || ||||| Sbjct 243255 ATGGTCTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 243218 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || ||| |||||| || ||||| ||||| ||| Sbjct 243672 CCTCCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAG 243613 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||| || || || || || || ||||| ||||| | || Sbjct 243612 AGGGTACGGCCATCTTCCAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGG 243553 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||||| ||| |||||| ||| | | | |||||||| | ||||||| Sbjct 243552 ATGCCTTCCTTATCCTGGATTTTGGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACC 243493 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || ||||| ||||| || || |||||||| Sbjct 243492 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAGATCTGCAT 243446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462184829586400