Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq27843 102 7e-17 >seq27843 Length=4971 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || ||| | | |||||||| ||||| |||| || | || Sbjct 1963 ATGGCTCTGCCCCCCTGCCACGCCCTGTGTCAGTTCTACGTGTGTGACGGCGAGCTGTCG 1904 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| | ||||| ||||||||||| ||||| || ||||| ||||| | Sbjct 1903 TGTCAGCTGTACCAGCGCTCGGGTGATATGGGCCTCGGGGTGCCTTTCAATATTGCCAGC 1844 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 |||||||||||||||||||| | || || | |||||||| || Sbjct 1843 TATGCACTTCTTACCTACATGATCGCACACATCACAGGACTCAA 1800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399333528147540