Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq27843 167 3e-36 >seq27843 Length=4971 Score = 167 bits (184), Expect = 3e-36 Identities = 145/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| ||||||||| || || | |||||||| || ||||| Sbjct 1799 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAA 1858 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| || ||||| || |||||||||||||||||||| || || ||||| ||| | Sbjct 1859 AGGCACCCCGAGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 1918 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| |||||| ||||||||| ||||| |||||| ||||| ||| || Sbjct 1919 ACACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGTGGGGCATGTCTGC 1978 Score = 111 bits (122), Expect = 2e-19 Identities = 115/150 (77%), Gaps = 8/150 (5%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || |||||||||||||||||||| || || || |||||||| || ||| Sbjct 2961 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCCAGGTCGCCTTCCTC 3020 Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 | |||| | |||| | | ||||||||||||||||||||||| ||||||| Sbjct 3021 TCGATCTGTG----AACCCGAGGTTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGA 3076 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||| || || |||| |||||||| |||| Sbjct 3077 TCTTCACCCCTTTCGCCGAGAGCTCTTTGG 3106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589818552888480