Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq27843 167 3e-36
>seq27843
Length=4971
Score = 167 bits (184), Expect = 3e-36
Identities = 145/180 (81%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
|| ||| || |||| ||| |||| ||||||||| || || | |||||||| || |||||
Sbjct 1799 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAA 1858
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865
|||||||| || ||||| || |||||||||||||||||||| || || ||||| ||| |
Sbjct 1859 AGGCACCCCGAGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 1918
Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925
|||||||||||| |||||| ||||||||| ||||| |||||| ||||| ||| ||
Sbjct 1919 ACACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGTGGGGCATGTCTGC 1978
Score = 111 bits (122), Expect = 2e-19
Identities = 115/150 (77%), Gaps = 8/150 (5%)
Strand=Plus/Plus
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
|||| |||| || |||||||||||||||||||| || || || |||||||| || |||
Sbjct 2961 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCCAGGTCGCCTTCCTC 3020
Query 146100 CC----TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155
| |||| | |||| | | ||||||||||||||||||||||| |||||||
Sbjct 3021 TCGATCTGTG----AACCCGAGGTTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGA 3076
Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185
|||| || || |||| |||||||| ||||
Sbjct 3077 TCTTCACCCCTTTCGCCGAGAGCTCTTTGG 3106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589818552888480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |