Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq22280 114 2e-20 >seq22280 Length=12780 Score = 114 bits (126), Expect = 2e-20 Identities = 179/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||||||||||||| | ||| || || |||| || | | Sbjct 8289 GAACTTCTCGAAGTTCCAGGCCACGTCGTTCCTGCAGACCGGGCTCCAGATGATTAATTT 8230 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||||| | | || | | | |||||||| || ||| || ||| | ||||| Sbjct 8229 GGGGTCAGTGATGAAGGCGGTTGGCTCGTCGCTGGGGAACGGGAGCTTCTCCCTCAGGAA 8170 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320 ||||| || ||||| || |||| ||||| || || |||||| | |||| ||| Sbjct 8169 CGCGAACAGGGGATGGGCATCCTT--CCCGTTCACATCCACCTTCTCCAGGAGCTGAAAC 8112 Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380 || ||||| ||||| || |||||||||| || |||||| || | ||| || ||||| Sbjct 8111 TTTGGCTCAAAGCCATTTCCAGGACGGATGTACTTCAGAGACATGAGGATTTCTTCATTC 8052 Query 83381 TGGGCGTTTTCCTG 83394 | | ||| ||||| Sbjct 8051 TTGCAGTTCTCCTG 8038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608530360080480