Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq22280 114 2e-20
>seq22280
Length=12780
Score = 114 bits (126), Expect = 2e-20
Identities = 179/254 (70%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
|||||||||||||||||||||||||||||| | ||| || || |||| || | |
Sbjct 8289 GAACTTCTCGAAGTTCCAGGCCACGTCGTTCCTGCAGACCGGGCTCCAGATGATTAATTT 8230
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262
|||||| | | || | | | |||||||| || ||| || ||| | |||||
Sbjct 8229 GGGGTCAGTGATGAAGGCGGTTGGCTCGTCGCTGGGGAACGGGAGCTTCTCCCTCAGGAA 8170
Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAG 83320
||||| || ||||| || |||| ||||| || || |||||| | |||| |||
Sbjct 8169 CGCGAACAGGGGATGGGCATCCTT--CCCGTTCACATCCACCTTCTCCAGGAGCTGAAAC 8112
Query 83321 TTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTC 83380
|| ||||| ||||| || |||||||||| || |||||| || | ||| || |||||
Sbjct 8111 TTTGGCTCAAAGCCATTTCCAGGACGGATGTACTTCAGAGACATGAGGATTTCTTCATTC 8052
Query 83381 TGGGCGTTTTCCTG 83394
| | ||| |||||
Sbjct 8051 TTGCAGTTCTCCTG 8038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608530360080480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |