Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq27843 104 2e-17 >seq27843 Length=4971 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| || |||||||| | || | || | |||||| ||||| || ||||||||||| Sbjct 1809 GTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAAAGGCACCCCG 1868 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || ||||||||| | || | || || | |||||| || |||| || |||||||| || Sbjct 1869 AGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAG 1928 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||||| || | || |||||||||| ||||| Sbjct 1929 AACTGACACAGGGCGTGGCAGGGGGGCAGAGCCAT 1963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346636024232840