Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 95.1 2e-14
>seq15996
Length=6831
Score = 95.1 bits (104), Expect = 2e-14
Identities = 174/255 (68%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844
||||| ||| || || | ||||||||||| || || ||| || || || ||||| ||
Sbjct 1257 GCCGATTCCCCCGGCCGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAAATGCC 1198
Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904
|| ||||| || || | | | | || |||||||| ||| || || || || ||
Sbjct 1197 TTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGT 1138
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| || || || |||||||| || ||||| || | | | ||||| || | ||
Sbjct 1137 TCCCGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 1078
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
|| |||||| | | ||||||| | | ||| || ||||||| || | ||| | |||
Sbjct 1077 CGTCTCAATGGCTGCGCTGATGTCCGTTTTGTGGATCCCGACAGATACTCTCATGAGCAT 1018
Query 95025 GTCCTGAGGGCGCTC 95039
|| ||| || |||||
Sbjct 1017 GTGCTGCGGACGCTC 1003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989140081276460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |