Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq10152 156 3e-33 >seq10152 Length=26754 Score = 156 bits (172), Expect = 3e-33 Identities = 216/297 (73%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 91810 CTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAA 91868 ||||||| ||| |||||||| |||||| |||| ||||| | | ||| || || | | Sbjct 8214 CTTTTCCAGCATAGAGGACTGCAACATTATCACAGACACAG-CGTCCAAGCTCGAGCGCA 8156 Query 91869 GTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGG 91928 | |||||||||||||| |||||||| || || || || ||||| |||||||| || | Sbjct 8155 GCGGCTTCTACTGGGGCCCTTTGGGAGTGGAAGAAGCCCATCGCATGCTGCGGGACGCTC 8096 Query 91929 CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGT 91988 | || || ||||| ||||| || || ||| | || || |||||||| ||||||||||| | Sbjct 8095 CGCTTGGAAGCTTCCTCATCCGCGACAGCCGTCAGAAAGACGTCTTCTTCACGCTGTCCT 8036 Query 91989 ATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG-GACAAGCAATTTTCC 92047 | ||| | | |||| || ||||| ||| | || || |||||| | ||| | || || Sbjct 8035 ACCACGCCAAGTCCGGGCCGGTCAGCGTGCGCATCGACTACAAGCGGCAA-AAGTTCTCA 7977 Query 92048 TTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACCATTACATC 92104 |||| || | | | | || || || || || ||||||||| ||||||||| Sbjct 7976 CTGGCGGGCAACGAGCGCTCCTTCCCAACGCTCTTTGCCCTGTTGGAGCATTACATC 7920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356081592005836