Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq10152 156 3e-33
>seq10152
Length=26754
Score = 156 bits (172), Expect = 3e-33
Identities = 216/297 (73%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 91810 CTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAA 91868
||||||| ||| |||||||| |||||| |||| ||||| | | ||| || || | |
Sbjct 8214 CTTTTCCAGCATAGAGGACTGCAACATTATCACAGACACAG-CGTCCAAGCTCGAGCGCA 8156
Query 91869 GTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGG 91928
| |||||||||||||| |||||||| || || || || ||||| |||||||| || |
Sbjct 8155 GCGGCTTCTACTGGGGCCCTTTGGGAGTGGAAGAAGCCCATCGCATGCTGCGGGACGCTC 8096
Query 91929 CACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGT 91988
| || || ||||| ||||| || || ||| | || || |||||||| ||||||||||| |
Sbjct 8095 CGCTTGGAAGCTTCCTCATCCGCGACAGCCGTCAGAAAGACGTCTTCTTCACGCTGTCCT 8036
Query 91989 ATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG-GACAAGCAATTTTCC 92047
| ||| | | |||| || ||||| ||| | || || |||||| | ||| | || ||
Sbjct 8035 ACCACGCCAAGTCCGGGCCGGTCAGCGTGCGCATCGACTACAAGCGGCAA-AAGTTCTCA 7977
Query 92048 TTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACCATTACATC 92104
|||| || | | | | || || || || || ||||||||| |||||||||
Sbjct 7976 CTGGCGGGCAACGAGCGCTCCTTCCCAACGCTCTTTGCCCTGTTGGAGCATTACATC 7920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356081592005836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |