Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq20292 87.8 4e-12 >seq20292 Length=13069 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 78486 GAGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCA 78545 |||| | |||||||||| ||||||| || || || || || ||||| | || |||| Sbjct 7182 GAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCATCGAGTATCTGGATACAGTGTTTTTCA 7123 Query 78546 TCCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGT 78605 |||| | || ||||| || || ||| ||| || || || || || || | || |||| Sbjct 7122 TCCTGAGGAAAAAATTCAACCAGGTTACTTTCCTGCACGTCTACCACCACTGCACCATGT 7063 Query 78606 TTACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648 | || | | ||||| || || |||||| | ||||||||||| Sbjct 7062 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACA 7020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150881892752496