Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq471 100 3e-16 >seq471 Length=23154 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 |||||| |||| || | ||||| ||| | || || ||||| || | ||| || ||| Sbjct 16869 TCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 16810 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 | |||| | || ||||||||||| ||| | ||||| | || ||||| || || || Sbjct 16809 GAGAGTGCGGCCGTCTTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGG 16750 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 || || || || || | || || || |||||| ||| ||||| | | || || Sbjct 16749 GATTCCCTCCTTATCCTGGATCTTAGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCCAC 16690 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||||||||||||||| Sbjct 16689 CTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCAT 16642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448095005356320