Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq27092 190 3e-44 >seq27092 Length=2463 Score = 190 bits (210), Expect = 3e-44 Identities = 203/268 (76%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | | || || ||||||||||| |||||||||||||| ||||| Sbjct 248 CGCTAAGCGGCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 307 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||||||||| || |||||||| |||||| |||| || || |||| || |||| Sbjct 308 CCGCCGTCTGGCTCGCCGCGGTGGAGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 367 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| |||||| ||||||| ||| || |||| |||||| || ||| ||||| Sbjct 368 CCGCGGTGTGTTGAAGGTCTTCCTGGAGAATGTGATCCGTGATGCCGTCACCTACACCGA 427 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || ||| |||||||| | || ||||| |||| | || || Sbjct 428 GCACGCCAAGAGAAAGACCGTGACCGCCATGGATGTGGTTTATGCTCTGAAGAGGCAGGG 487 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || || || ||| ||||| Sbjct 488 ACGCACTCTGTACGGCTTCGGAGGTTAA 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79043188283316