Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq27092 190 3e-44
>seq27092
Length=2463
Score = 190 bits (210), Expect = 3e-44
Identities = 203/268 (76%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||| || || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 248 CGCTAAGCGGCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 307
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || |||||||| |||||| |||| || || |||| || ||||
Sbjct 308 CCGCCGTCTGGCTCGCCGCGGTGGAGTGAAGCGTATCTCCGGTCTGATCTACGAGGAGAC 367
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| ||||||| ||| || |||| |||||| || ||| |||||
Sbjct 368 CCGCGGTGTGTTGAAGGTCTTCCTGGAGAATGTGATCCGTGATGCCGTCACCTACACCGA 427
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || ||||| |||| | || ||
Sbjct 428 GCACGCCAAGAGAAAGACCGTGACCGCCATGGATGTGGTTTATGCTCTGAAGAGGCAGGG 487
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || || || ||| |||||
Sbjct 488 ACGCACTCTGTACGGCTTCGGAGGTTAA 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79043188283316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |