Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq471 89.7 5e-13
seq4563 86.0 6e-12
>seq471
Length=23154
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | ||||| || || | || || || | |||||| | || | || |
Sbjct 16638 CAAGATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCTGGAGGTGGAGCC 16697
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| ||||||||||||| | |||||| ||||| || || || || || || || ||
Sbjct 16698 CAGCGACACCATCGAGAACGTCAAAGCTAAGATCCAGGATAAGGAGGGAATCCCCCCGGA 16757
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| || || || || | || ||||||||| || ||||| | | | || ||||||
Sbjct 16758 CCAGCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAAGACGGCCGCACTCTCTCCGACTA 16817
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
||||| || || || || || |||| ||||| || | || || ||||||||
Sbjct 16818 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGGAAA 16871
>seq4563
Length=103851
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 71716 TGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGAC 71775
|||||| || || || || | | | | ||||||||||||||||||||||| ||||||||
Sbjct 70380 TGAGGGGAAGATGCATGGTTTCTTGAGGATGTACTGGGCCAAAAAGATTCTGGAGTGGAC 70439
Query 71776 TCAAACTCCCGAGCAGGCGCTC-GAGTATTCTATTTATCTAAACGATAGATACAGTCTCG 71834
| | |||||| |||||||| | || || | || ||||||||| | || || |
Sbjct 70440 TTCTTCACCCGAGGAGGCGCTCTCAATA-GCTCTGTACCTAAACGATCGCTATGAGCTGG 70498
Query 71835 ACGGTCGCGATCCTAACGGTTATGTCGGT 71863
| || | |||||||| || | |||||||
Sbjct 70499 ATGGCCAGGATCCTAATGGCTTTGTCGGT 70527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478452913400640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |