Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq471 109 4e-19 >seq471 Length=23154 Score = 109 bits (120), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||||| | || | |||| Sbjct 16853 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCT 16794 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||||| || | || |||| ||| |||||| || | ||||| || || Sbjct 16793 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTATCC 16734 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | ||||||| ||||||| |||| |||||||| Sbjct 16733 TGGATCTTAGCT--TTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGG 16676 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || ||||| || || || ||||| |||||||| ||| Sbjct 16675 TCTTACCGGTGAGGGTCTTCACAAAGATCTGCATCTTG 16638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404915145405880