Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq471 114 1e-20
seq15996 95.1 1e-14
>seq471
Length=23154
Score = 114 bits (126), Expect = 1e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || ||||| || || | |||||||| || |||| || || ||||| ||
Sbjct 16639 AAGATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 16698
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| ||| | || | ||||| || || || || |||||||| || || || ||
Sbjct 16699 AGCGACACCATCGAGAACGTCAAAGCTAAGATCCAGGATAAGGAGGGAATCCCCCCGGAC 16758
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || | || || || |||||||||||| | || || |||||| ||||||| |||
Sbjct 16759 CAGCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAAGACGGCCGCACTCTCTCCGACTAC 16818
Query 22396 AACATTCAAAAAGAATCCACC 22416
||||| || || || ||||||
Sbjct 16819 AACATCCAGAAGGAGTCCACC 16839
>seq15996
Length=6831
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796
||||||| || ||||| | ||| | || || |||| |||||||||| || || || |
Sbjct 1816 TGTACTCAACTATTTCTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGT 1757
Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
| || ||| ||||||| || |||||||||| |||||||||||| || |||||
Sbjct 1756 TGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTC 1705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419548898389780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |