Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq27843 89.7 5e-13 >seq27843 Length=4971 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 20263 AGTTAAGAGG-GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACC 20321 || ||||| | | |||||||||||| || ||||| || || | ||||| || ||||| | Sbjct 1828 AGGTAAGAAGTGCATAGCTGGCAATATTGAAAGGCACCCCGAGGCCCATATCACCCGAGC 1887 Query 20322 TCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGAC 20381 ||| ||||||||||| || ||||| |||||| || || || ||||| | ||| | Sbjct 1888 GCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGACACAGGGCGTGGC 1947 Query 20382 AGGGCGGAAGCGCCAT 20397 |||| || || ||||| Sbjct 1948 AGGGGGGCAGAGCCAT 1963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441179633194080