Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq27843 89.7 5e-13
>seq27843
Length=4971
Score = 89.7 bits (98), Expect = 5e-13
Identities = 102/136 (75%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 20263 AGTTAAGAGG-GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACC 20321
|| ||||| | | |||||||||||| || ||||| || || | ||||| || ||||| |
Sbjct 1828 AGGTAAGAAGTGCATAGCTGGCAATATTGAAAGGCACCCCGAGGCCCATATCACCCGAGC 1887
Query 20322 TCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGAC 20381
||| ||||||||||| || ||||| |||||| || || || ||||| | ||| |
Sbjct 1888 GCTGGTACAGCTGACACGACAGCTCGCCGTCACACACGTAGAACTGACACAGGGCGTGGC 1947
Query 20382 AGGGCGGAAGCGCCAT 20397
|||| || || |||||
Sbjct 1948 AGGGGGGCAGAGCCAT 1963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441179633194080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |