Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq471 138 3e-27 >seq471 Length=23154 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| |||||||| | ||||| || |||||| Sbjct 16832 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTGTTTGCCGGCGAAG 16773 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || |||||||| || ||||||||||| || ||||| ||||| Sbjct 16772 ATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTATCCTGGATCTTAGCTTTGACGTTC 16713 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| ||||| ||||| || ||||| || Sbjct 16712 TCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTCACA 16653 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 16652 AAGATCTGCAT 16642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179125217358136