Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 168 8e-37
seq25531 95.1 1e-14
>seq15996
Length=6831
Score = 168 bits (186), Expect = 8e-37
Identities = 842/1320 (64%), Gaps = 72/1320 (5%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| | || | | |||| ||||| |||| ||| ||||||||||||
Sbjct 2384 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 2325
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| |||||||| || |||| || |||||||| | | || | | || |||
Sbjct 2324 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCC 2265
Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115
|| ||||| | |||||| || | || || | |||||| |||| || ||
Sbjct 2264 TTCAGGGCCTTCCAGTCCAGCAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 2211
Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCC---CTCAACC 114172
|||||||| || | | | | || || || || | |||||||| ||||| |||| |
Sbjct 2210 TGGAGGATGCCCTTGCTGACCGGAGAGCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCG 2151
Query 114173 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232
|||| ||| |||||||||| ||||| |||| || || |||||||| || ||
Sbjct 2150 ---GCCAGCTCGCAGCTCGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATTTGAATG 2094
Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292
|||| || |||||| | || |||| | || | || || | || ||
Sbjct 2093 TTCAGCAGCTGAGCCTCGGGGCTTTCGAACGGGTAGCGCATGAGGATGAAGGCGTCTGCC 2034
Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTC 114351
| ||| || || |||| || || || | || | | | || ||||| || || | ||
Sbjct 2033 AAACCCTGCACGCCGATTCCGATCGGCCTGTGGCGCTTGTTGGACTTCTC---CGCT-TC 1978
Query 114352 ---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 114408
||| || || | || | ||||||| | | || | |||||| || || || ||
Sbjct 1977 AGGCACTGGGTAGTAGTTGATTTCGATAATCTTGTTCAAGTTTTTGACGATGACTTTGGT 1918
Query 114409 GATTTCATGAAGCT--TTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAG 114464
| || | ||| ||| ||| |||||| | || ||| |||| ||| |
Sbjct 1917 CA---CAA-ACGCTAGTTTTTTAAAGTCAAAAGTCCG---CTCAGGGGTGACGTACATGT 1865
Query 114465 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524
|| ||||| || |||||||||||||| | |||||| | |||||||| | |
Sbjct 1864 TGAGCGCGATGGAGGCCAGATTACACACCGCTACCTCATCGTCGCTGGTGTACTCAACTA 1805
Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584
|||| || || | || || || |||||||||| |||| || || ||| |||
Sbjct 1804 TTTCTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGT 1745
Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644
| || || || ||||| |||||||| ||||| || || ||||| ||||||| || ||| |
Sbjct 1744 TGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCCGTCTGGGACTCGATAATGG 1685
Query 114645 CCTTCCAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 114703
| | ||| || | | | | || ||| | ||| | | |||||||| ||| ||| |
Sbjct 1684 CGTGCCACACCTGCTGAGCCT-TCACCACGCGCTTGACCCTCCCCTCCTTCTCATACGTG 1626
Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763
||||| || || ||||| || ||| | ||| ||||| || || | ||
Sbjct 1625 GTGTACAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGTTCGGA 1566
Query 114764 CAGAAGAGAGACCA---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820
|| | |||||||| ||| | |||| || | ||||||||| ||||| ||||||
Sbjct 1565 CACATCAGAGACCAGTCTTGGTTGCTCTCC---ACTCTCTTCATGAACAGGTCGGGGATC 1509
Query 114821 CAGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 114879
|| | || |||| || || | | | ||| || | | || || || ||
Sbjct 1508 CACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCGGTG-TTCTTCTTCAG 1450
Query 114880 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC---- 114935
||||| ||||| | | || |||||| || |||||||||| || | | |
Sbjct 1449 CTCCAGGAAGTCAAACACGTCGAAGTGCCAGGGCTCCAGGTACATGGCAAACGCTCCGGG 1390
Query 114936 CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995
||| | | || |||||| || || | ||| ||| || | || | ||||| |
Sbjct 1389 CCTCTTGTTG-CCTCCCTGGTCGACGTAACGCGCCGTGTTGTTGTAGACTCTCAGCATGG 1331
Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCT--CTGAC 115053
| | || || | || | ||| || || || | || || ||| | | |
Sbjct 1330 GGACGAGCCCGTTGGAGTTGCCGTTGGTGCC-------GGCGATGTA---GCTCCCCGTC 1281
Query 115054 -ATC--ATGGATGTG-----CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105
||| ||| | || || || || ||||| ||| |||| ||||| | || |||
Sbjct 1280 GATCGGATGCAGCTGACCGCCACGCCGATTCCCCCGGCCGACTTGGAGATGAGGGCACAC 1221
Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165
| | | || || |||| || || ||||| ||| |||| | |||| |||||||||
Sbjct 1220 TGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGCAG 1161
Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225
|| |||| |||||||| || || ||||||||||| || || | |||||| |||||
Sbjct 1160 CTGGACAGCTGTGGCCTGTTGGTTCCCGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC 1101
>seq25531
Length=26544
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| ||||||| | |||||||||| |||| ||| ||||| || ||
Sbjct 21136 TAGATGTTGCTGGTGTAGGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTTGAA 21195
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033
|||||||||||||| |||| ||| || |||||
Sbjct 21196 GCTGTGGGCATGGGGGCCAAGAGCAGACTGTT 21227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597092168196960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |