Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq730 91.5 2e-13
seq18807 87.8 2e-12
seq18806 87.8 2e-12
seq18046 87.8 2e-12
>seq730
Length=28029
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 6151 TTACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 6210
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 6211 CTATACTAACGAGGA 6225
>seq18807
Length=3261
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || || | |||||||||| ||||| |||||||||||||||| ||||| |||||
Sbjct 177 TCTCCCCGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 236
Query 57066 ATACTACCGAGGATTG 57081
|||||| |||||| ||
Sbjct 237 ATACTAACGAGGACTG 252
>seq18806
Length=4747
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || || | |||||||||| ||||| |||||||||||||||| ||||| |||||
Sbjct 1747 TCTCCCCGTCAGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 1688
Query 57066 ATACTACCGAGGATTG 57081
|||||| |||||| ||
Sbjct 1687 ATACTAACGAGGACTG 1672
>seq18046
Length=8152
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 4166 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 4225
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 4226 ATACTAACGAGGA 4238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542975062918080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |