Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq12683 246 4e-60
seq5514 208 1e-48
seq9505 172 7e-38
seq33041 141 1e-28
>seq12683
Length=55699
Score = 246 bits (272), Expect = 4e-60
Identities = 1018/1585 (64%), Gaps = 22/1585 (1%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
|| || ||| | || ||||| || | || || |||||| || || || ||||| | |
Sbjct 9012 TCGTCCTCAGCCTTGTACTTATCAGAGTCCTGTACCATCCGCTCTATTTCCTCTTT-GCT 9070
Query 6629 AAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687
|| | ||||| ||||| || || || || || | ||| || | | || || |
Sbjct 9071 AAGGCGGCCCTTGTCATTGGTGATGGTGATTTTGTTTTCTTTGCCGGTGCTTTTGTCGAC 9130
Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747
|| ||||||| ||| || || ||||| | ||||| |||| | | ||||||
Sbjct 9131 GGCGGACACATTCAGAATGCCGTTGGCATCGATGTCGAAAGTTACCTCCACCTGTGGT-- 9188
Query 6748 ACCCCTCGGTGCGGCTGGA---ATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
|| |||||| | | ||||| ||||| || | ||||| | || || | |||| ||
Sbjct 9189 ACACCTCGGGGAG-CTGGAGGGATACCTGTGAGCTCAAACTTGCCCAGGAGGTTGTTGTC 9247
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864
| | | | | | ||||| || || || | ||| ||| | || || |||||
Sbjct 9248 CTTGGTCATGGCTCTCTCACCCTCGTACACCTGAATCAGCACACCTGGCTGGTTATCCGA 9307
Query 6865 TGCCGTTGAGAAGATTTGT-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923
|| |||||| | || ||| | || | || || || || || | || | |
Sbjct 9308 GTATGTGGAGAAGGTCTGGGTCTGT-TTGGTGGGGATGGTGGTGTTGCGTTTGATTAGAG 9366
Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983
| ||||||| ||||| ||| || | || |||||||| || | |||||||| || |
Sbjct 9367 GCGTCATAACTCCACCTGCAGTCTCAATGCCCAGAGACAGGGGAGCCACGTCCAGCAGCA 9426
Query 6984 ACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043
||| ||||| || ||| |||||| | | ||| || || ||||| | || |
Sbjct 9427 GCAGATCTTGGACGTTCTCGGAAGTGTCACCCATGAGGATAGCAGCCTGGACAGCAGCAC 9486
Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103
|||| || || || ||||| ||||| || | || ||||| || | ||||||||| | |
Sbjct 9487 CGTAGGCCACGGCTTCATCTGGGTTGATGCTCTTGTTCAGGTCCCTGCCGTTAAAAAAGT 9546
Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163
|| || | | || ||||| || |||| ||| || ||||| |||| || |||||||
Sbjct 9547 CCTGCAAAAGCTTCTGGATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACTATTTCAT 9606
Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223
||| | || ||||| | ||| | ||| | || | || || || ||||||| |
Sbjct 9607 GGACTCTGGACTTATCCAGCTTGGCATCTTGCAGGGCCTTCTCAACTGGTTCCAGTGTTC 9666
Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283
| ||| | || || || ||||| ||||| | || ||||| || ||||| |
Sbjct 9667 CCCTGAAAAGCTCGGAGTTGAGCTCTTCAAAGCGTGCCCTTGTGATGGAGGTGTAGAAGT 9726
Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343
| | ||| || | | || || || |||||| | | || | | || || | || |
Sbjct 9727 CGATGCCCTCAAACAGAGAGTCGATCTCAATGCTAGCCTGGGTGCTAGAGGACAGGGTCC 9786
Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403
||| || | |||||| || || || | | | | || | | || | || |
Sbjct 9787 TCTTCGCTCTCTCACAAGCTGTGCGCAGCCTCCTCACTGCTCTCTTATTTTGGCTGATGT 9846
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462
| ||||| ||||| | |||||| || || | | || || || | | || ||
Sbjct 9847 CCTTCTTGTGTTTTCTTTTAAATTCCTCTACAAAATGGTTGACC-ATCCGGTTGTCAAAG 9905
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
|| || || || | |||||| || |||||||| ||||| || ||||||||||| | ||
Sbjct 9906 TCCTCCCCGCCAAGGTGTGTGTCTCCCGCGGTGGCTTTCACCTCAAAGATACCGTCCTCG 9965
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | | | || || ||||| || || ||||| || ||||| ||||| || ||
Sbjct 9966 ATGGTCAGGATGGACACGTCAAAGGTGCCTCCACCAAGATCAAAGATGAGCACATTGCGC 10025
Query 7583 TCGTCGTCTTTGTTC-TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641
|| | ||||| | || || || ||||| || || || || || || || || || ||
Sbjct 10026 TC-CCCTCTTTTACCTTTGTCCAGGCCGTAAGCAATGGCTGCTGCTGTGGGCTCGTTGAT 10084
Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701
|| | ||| ||||| |||| || | || || || || ||||| | || ||
Sbjct 10085 GATCCTCAGAACATTCAGTCCAGAGATCACCCCGGCGTCCTTGGTGGCTTGCCTCTGGGA 10144
Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761
||||| || || || || || || | |||||| | | ||||| | || || || |
Sbjct 10145 GTCGTTGAAATAAGCGGGAACTGTGATGACCGCATTTGACACTTTTTGTCCCAGGTAGGC 10204
Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821
|| ||||| || |||||||| || ||||| || || || || || | |||
Sbjct 10205 CTCAGCGATCTCCTTCATTTTAACTAGGACCATGGAGGAGATTTCCTCTGGGTAAAAGGC 10264
Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881
|| || || || || | ||||| | | |||| || || || | | ||| ||
Sbjct 10265 CTTAGTCTCCCCTTTGTACTCAACCTGGACTTTGGGCTT-TC--CATTATCACTGATCAC 10321
Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941
||| | | ||| |||||| ||| ||||| ||| ||||||||| || ||
Sbjct 10322 CTTGAATGGCCAGAGTTTCATGTCGGACTGGACAATGGAGTCGTTAAACTTTCTCCCAAT 10381
Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001
||||| || || ||||| | |||||| |||| |||||||| |||||||| || ||
Sbjct 10382 GAGACGTTTAGCGTCAAAGATTGTGTTGGTGGGATTCATGGCAACCTGGTTCTTGGCAGC 10441
Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGAT 8060
|| || || || | || | | || || || || || || | |||| || |||| |
Sbjct 10442 ATCTCCAATGAGCC--TC-TCTGTGTCAGTGAAGGCCACATA-GCTGGGAGTGGTTCTGT 10497
Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120
| || |||||||| || || || || || | | | || | || ||||| || ||||
Sbjct 10498 TGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAAACACCGACACAAGAAT 10557
Query 8121 ACGTTGTTCCTAAATCAATACCGAT 8145
| || || || | |||||| || ||
Sbjct 10558 AGGTGGTGCCCAGATCAATGCCAAT 10582
>seq5514
Length=41840
Score = 208 bits (230), Expect = 1e-48
Identities = 373/542 (69%), Gaps = 6/542 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || || |||||||||||||| | ||||| || ||||| || || |||
Sbjct 37423 GCACCATAGGCCACTGCTTCATCGGGGTTAATGCTCTTATTGAGGTCTTTCCCATTGAAA 37482
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | | | || || || || || || || || || || ||||| || ||
Sbjct 37483 AAGTCCTGCAGGAGCTTCTGGATCTTGGGAATACGAGTGGAACCTCCCACCAAGACAATG 37542
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|| || | || | || || ||||| | ||| || || | || || ||||| ||||
Sbjct 37543 TCGTTGATTTGAGCCTTGTCCATCTTGGCGTCACGGAGCGACTTCTCCACAGGCTCCAGG 37602
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
| ||||| ||||| ||| |||||||| || || | || || || || |||
Sbjct 37603 GTTCCTCGGAATAAGTCTGCGTTCAGCTCCTCAAAGCGGGCCCTTGTGATTGAGGTGTAG 37662
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
||||| | || ||||| | ||||| ||||| ||| | | || | | ||||| ||
Sbjct 37663 AAATCGATTCCCTCGTACAGAGAATCGATTTCGATGCTGGCCTGGGTGCTGGAAGACAAA 37722
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || | |||||| || || || | |||||| | || | | ||| ||
Sbjct 37723 GTGCGCTTCGCCCTCTCACAAGCGGTGCGCAGACGACGGACCGCTCTCTTGTTGTCGCTG 37782
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456
||||| ||||| | || || || |||||| | ||||| || || | | | | |
Sbjct 37783 ATATCCTTCTTGTACTTGCGCTTGAACTCTGCGATGAAGTGGTTGACCATGCGGTT---A 37839
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| ||||| |||||||||||||| || || || || | ||||| |||||||| ||
Sbjct 37840 TCGAAGTCTTCTCCACCCAAGTGTGTGTCGCCTGCTGTGGACTTGACCTCAAAGATGCCG 37899
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | || | || || |||||||| ||||| ||||||||||| ||||| |||
Sbjct 37900 TCTTCAATAGTCAAGATGGAGACGTCAAACGTGCCACCGCCCAGGTCAAAGATGAGGACG 37959
Query 7577 TT 7578
||
Sbjct 37960 TT 37961
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/141 (77%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACA 7653
|| || || ||||| || |||||||| || || ||||||||||| || ||||||| ||||
Sbjct 38165 TTTTTGTCCAGACCATAAGCGATAGCAGCAGCAGTTGGTTCATTGATGATACGAAGGACA 38224
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||| |||| ||| || | |||||||| || || || || || || || || |||||
Sbjct 38225 -TTCAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCATTGAAGTA 38283
Query 7714 GGCCGGGACCGTTACGACCGC 7734
||| || || || || || ||
Sbjct 38284 GGCAGGCACAGTCACTACAGC 38304
>seq9505
Length=2747
Score = 172 bits (190), Expect = 7e-38
Identities = 333/486 (69%), Gaps = 8/486 (2%)
Strand=Plus/Plus
Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
|| || |||||||||||||| || |||||||| || || || ||||| | || ||||
Sbjct 1955 TTGTCCAGACCGTACGCGATGGCGGCCGCCGTCGGCTCGTTGATAATCCTCAGGACGTTC 2014
Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717
|| || || || |||| |||||||| || ||||| || || ||||| ||||| |||
Sbjct 2015 AGTCCCGCGATGACGCCCGCGTCTTTCGTGGCCTGTCGCTGGGAGTCGTTGAAGTACGCC 2074
Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777
|||||||| |||||||||| | || | | ||||| || | || ||||| || |||
Sbjct 2075 GGGACCGTGACGACCGCGTTGGACACCTGGTGGCCGAGGTAGGCCTCGGCGATCTCCTTC 2134
Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT-TTCACCGTT 7836
|| || || ||||| || || ||||| || | | | | |||| || || || ||
Sbjct 2135 ATCTTCAGCAGGACCATGGAGGAGATCTCCTC-GGGGTAGAAGGTTTTGTCCTCCCCTTT 2193
Query 7837 AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATC 7896
| || || | || |||| || | || | || | ||||| | | ||| |
Sbjct 2194 GTATTCCACCTGGATTTTGGGCTTCCCTCCATCTCC---AACCACCTTGAAGGGCCAGTG 2250
Query 7897 TTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATC 7956
||||| || | || ||| | | || ||||||||||| || || | ||| |||||
Sbjct 2251 CTTCATGTCAGCCTGCACCACTGGATCATCCAACTTTCTTCCAATCAGTCTCTTGGCATC 2310
Query 7957 AAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACG 8016
||| || ||||| ||||||||| || |||||||| |||||||||||||| || |
Sbjct 2311 AAACACGGTGTTGCTGGGGTTCAGAGCCACCTGGTTCTTGGCCGCGTCCCCGATCAGCC- 2369
Query 8017 TTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGC 8076
|| | | || || ||||| || || ||||| || | || || |||||||| ||
Sbjct 2370 -TC-TCGGTGTCGGTGAACGCCACATAGCTGGGGGTGGTCCTGTTGCCCTGGTCGTTGGC 2427
Query 8077 AATAAT 8082
|| ||
Sbjct 2428 GATGAT 2433
>seq33041
Length=13230
Score = 141 bits (156), Expect = 1e-28
Identities = 357/541 (66%), Gaps = 4/541 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || |||||||| ||||| || | || || || || || |||||
Sbjct 2093 GCACCATAGGCCACAGCCTCATCAGGGTTGATGCTCTTGTTGAGGTCACGGCCATTAAAC 2152
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || | |||||| || ||||| ||||| || || || |||| || ||
Sbjct 2153 AAGTCCTGCAGCAGCTTTTGAATCTTGGGGATACGTGTGGAGCCCCCCACCAGGACAATA 2212
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | ||||| ||||| | || | || | || || ||||| || |
Sbjct 2213 TCATGGATCTGACTCTTATCCATCTTGGCATCCCTCAGGGCCTTCTCCACAGGCTCGAGG 2272
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
| ||| |||| ||| | || || |||||||| || | ||| ||||| || |||
Sbjct 2273 GTTCCACGAAACAGGTCTGCATTGAGCTCTTCAAAACGAGCCCTGGTGATGGAAGTGTAG 2332
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATA 7337
||||| || || ||||| | |||||||| ||||| | | || ||| | | |||
Sbjct 2333 AAATCTACCCCTTCGTAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTGCTGGAGAGG 2392
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|| ||||| || || || || || || || | |||||| | || || ||| |
Sbjct 2393 --GTGCGCTTGGCACGTTCGCAGGCTGTGCGCAGACGACGGACAGCTCGTTTGTTGTTGT 2450
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
|| || || || || || || ||||| || |||||| || | | ||
Sbjct 2451 TGATTTCCTTTTTGAACTTGCGCTTGAACTCAGCAATGAAGTGGTTAACCATGCGGTTAT 2510
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
| |||||||||||||||||||| || || || || || | ||||| |||||||| ||
Sbjct 2511 CAAAATCTTCACCACCCAAGTGAGTGTCACCAGCTGTGGACTTGACCTCAAAGATGCCAT 2570
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || || | | | || |||||||| |||||||| || |||||||| || || || |
Sbjct 2571 CCTCGATAGTCAGGATTGACACATCAAAAGTACCACCTCCAAGGTCAAAGATAAGAACAT 2630
Query 7578 T 7578
|
Sbjct 2631 T 2631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634854834130080
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