Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq25531 102 1e-16 seq95 82.4 9e-11 >seq25531 Length=26544 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552 ||||| || ||||||||||| ||| || || |||| ||| || || || ||| Sbjct 22096 TCATCTTTGCTTGTGTACTCTACAATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCC 22155 Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612 | ||||| ||||| ||||| ||||||| || ||||||||||||||||| ||||| || Sbjct 22156 AGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTAAGGCGTACCG 22215 Query 106613 GTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 ||||| ||||| |||| | || || | ||||| Sbjct 22216 GTCTCTGTCTGAGACTCAATGATGGCGTACCACA 22249 >seq95 Length=91801 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||| | | ||| || || || ||| || ||||| ||||| || || | ||||| Sbjct 11834 CCTCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGTCCTCTCTTCT 11893 Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412 | | ||||||||| || |||||| ||||||||||| || |||||||| ||||| | Sbjct 11894 TGAGCCAATAAATGGCAGCGAATGAGCCGGAGAAGAATATTCCCTCCACTGCTGCAAAAG 11953 Query 117413 CAAAAAGGCGCTC 117425 | | || ||||| Sbjct 11954 CCACAATTCGCTC 11966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589722594902880