Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq25531 102 1e-16
seq95 82.4 9e-11
>seq25531
Length=26544
Score = 102 bits (112), Expect = 1e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 106493 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCC 106552
||||| || ||||||||||| ||| || || |||| ||| || || || |||
Sbjct 22096 TCATCTTTGCTTGTGTACTCTACAATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCC 22155
Query 106553 AAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 106612
| ||||| ||||| ||||| ||||||| || ||||||||||||||||| ||||| ||
Sbjct 22156 AGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTAAGGCGTACCG 22215
Query 106613 GTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646
||||| ||||| |||| | || || | |||||
Sbjct 22216 GTCTCTGTCTGAGACTCAATGATGGCGTACCACA 22249
>seq95
Length=91801
Score = 82.4 bits (90), Expect = 9e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||| | | ||| || || || ||| || ||||| ||||| || || | |||||
Sbjct 11834 CCTCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGTCCTCTCTTCT 11893
Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412
| | ||||||||| || |||||| ||||||||||| || |||||||| ||||| |
Sbjct 11894 TGAGCCAATAAATGGCAGCGAATGAGCCGGAGAAGAATATTCCCTCCACTGCTGCAAAAG 11953
Query 117413 CAAAAAGGCGCTC 117425
| | || |||||
Sbjct 11954 CCACAATTCGCTC 11966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589722594902880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |