Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 300 3e-76
seq25531 86.0 1e-11
>seq15996
Length=6831
Score = 300 bits (332), Expect = 3e-76
Identities = 938/1456 (64%), Gaps = 36/1456 (2%)
Strand=Plus/Minus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||||| || |||| || |||||||| ||| | |||| || ||| ||||| |
Sbjct 2475 CATCTCCTCGCTCCACAGTCCCCTCTCCGTCAGGTCTTTGAGCAGGTGAGGATTCACTAT 2416
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
|| || ||||||||||||||||| | ||| | ||| ||| | | |||||||
Sbjct 2415 CTGAAACTCTCCCGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCGATGGA 2356
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||||||||||||||| || ||| ||| |||||||| || |||| |||||| ||
Sbjct 2355 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCT 2296
Query 221245 GTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACAGTGTCCTCC 221304
||| | || ||| | ||| || |||| | |||||||| |||
Sbjct 2295 GTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGGGCCTTCCAGTC-CAG-------- 2245
Query 221305 CAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACACCGGACT 221364
|||||| || ||||||
Sbjct 2244 CAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACCGGAGA 2185
Query 221365 CCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGC 221424
|| ||||||| ||||||||| ||| | ||||| | |||| | | ||||||
Sbjct 2184 GCCTTCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGC 2125
Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484
|||| |||||||||||||||||| |||| || || |||||||| |||
Sbjct 2124 GGCGTAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGAGCCTCGGGGCTTTCGAA 2065
Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544
|| |||| | ||| |||| |||| ||||| || ||||| ||||| |||||
Sbjct 2064 CGGGTAGCGCATGAGGATGAAGGCGTCTGCCAAACCCTGCACGCCGATTCCGATCGGCCT 2005
Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604
||| | | ||||||| ||||||| ||||| || || |||||| ||||| | ||
Sbjct 2004 GTGGCGCTTGTTGGACTTCTCCGCTTCAGGCACTGGGTAGTAGTTGATTTCGATAATCTT 1945
Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664
||| | ||| ||||||||| ||| | || || || || |||
Sbjct 1944 GTTCAAGTTTTTGACGATGACTTTGGTCACAAACGCTAGTTT-------TTTAAAGTCAA 1892
Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724
|||| || |||||| | | | | || || || | | |||||| |||||
Sbjct 1891 AAGTCCGC--TC----AGGGGTGACGTACATG--TTGAGCGCGATGGAGGCCAGATTACA 1840
Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
||| || ||||| || | | |||| |||| | || ||||| ||||||||||||| ||
Sbjct 1839 CACCGCTACCTCATCGTCGCTGGTGTACTCAACTATTTCTGTGCAGAGGTTGCTGCTTTT 1780
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| ||||| | | || || ||| | ||| ||||| ||||| ||||| |
Sbjct 1779 GATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTA 1720
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCA 221903
|| || || ||| ||| | | | | ||| || ||| | | ||| || |||
Sbjct 1719 CGGCGTACCGGTTTCCGTCTGGGACTCGATAATGGCGTGCCACACCTG-CTGAGCCTTCA 1661
Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963
|| | |||||| ||||| ||| |||||| ||| || ||| | || |||| |
Sbjct 1660 CCACGCGCTTGACCCTCCCCTC---CTTCTCATACGTGGTGTACAGCTTCTCGAACTCCT 1604
Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023
| || | ||||||||| || || ||| | |||||||||||| ||||| | ||
Sbjct 1603 CCCCCCAGCACTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGAGACCAGTCTTGGT 1544
Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083
|| | || |||| |||||| ||||| |||||||||| || | || || |||||||
Sbjct 1543 TGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACATGGCGTAGAAAAGGTCTCTGG 1484
Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143
|| |||||||||| ||| |||| ||| |||| |||| || ||||| | ||| ||
Sbjct 1483 CCCTCTGCTCCTCCTTTCCGGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCGAAGT 1424
Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203
|||| |||||||| || | ||| | || ||||| | ||||||||| ||||| || ||
Sbjct 1423 GCCAGGGCTCCAGGTACATGGCAAACGCTCCGGGCCTCTTGTTGCCTCCCTGGTCGACGT 1364
Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | || |||| ||| | || | || || || |||||||| |||||||
Sbjct 1363 AACGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCGTTGG 1304
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTC--AGGTTACTGGCAGACATGCCGATACCACC 222321
|||| ||||| || || ||| | || | | ||| | | || |||||| || ||
Sbjct 1303 TGCCGGCGATGTA-GCTCC-CCGTCGATCGGATGCAGCTGACCGCCACGCCGATTCCCCC 1246
Query 222322 GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTC 222381
||| || ||||| | ||| || ||| || ||||| ||||| || || |||
Sbjct 1245 GGCCGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTC 1186
Query 222382 CTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAA 222441
||||| | | ||||| || || |||| ||| | || ||| | ||||| ||
Sbjct 1185 GTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCCGCGTTGAA 1126
Query 222442 CAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGAC 222501
|||||||| |||||| || || | | |||| ||| | ||||||||| | | |
Sbjct 1125 GAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCAATGGC 1066
Query 222502 TCTGGCGATGTTGTCC 222517
| ||| || |||||
Sbjct 1065 T---GCGCTGATGTCC 1053
>seq25531
Length=26544
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182
|| || || ||||||||||||||||| | ||| | ||| ||| | || || |||
Sbjct 21103 ACCTGAAACTCTCCCGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGGCTCAATG 21162
Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242
||| ||||||||||||||||| || || || ||||||||||| |||| ||||||
Sbjct 21163 GACTCATTGTTGCCCAGGATCTGGGCAGTTGAAGCTGTGGGCATGGGGGCCAAGAGCAGA 21222
Query 221243 CTGTT 221247
|||||
Sbjct 21223 CTGTT 21227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928438291073280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |