Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq25531 102 1e-16
seq95 82.4 9e-11
>seq25531
Length=26544
Score = 102 bits (112), Expect = 1e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955
|| ||||| ||||| || || || || ||||| |||||||| || || |||| ||||||
Sbjct 22229 TCTCAGACAGAGACCGGTACGCCTTACATGCTCTACAAGGACGCCTGCAACAGGAAGAGC 22170
Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015
||||| ||||| |||| || ||||| | ||||| |||||||| ||| ||||||||
Sbjct 22169 AACCAGCAGAATCTGGGCACCATCAAATCCAGCAATCTGTGCACGGAGATTGTAGAGTAC 22110
Query 76016 ACAGATAAGGATGA 76029
||| || |||||
Sbjct 22109 ACAAGCAAAGATGA 22096
>seq95
Length=91801
Score = 82.4 bits (90), Expect = 9e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136
||||| || | || ||||| |||||||| || ||||||||||| |||||| ||
Sbjct 11966 GAGCGAATTGTGGCTTTTGCAGCAGTGGAGGGAATATTCTTCTCCGGCTCATTCGCTGCC 11907
Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196
||||||||| | |||||| | || || ||||| ||||| || ||| || || || |||
Sbjct 11906 ATTTATTGGCTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGATT 11847
Query 65197 TCCCGAGATGAGG 65209
| | |||||||
Sbjct 11846 AGCAGGGATGAGG 11834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596308511314560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |