Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq25531 102 1e-16 seq95 82.4 9e-11 >seq25531 Length=26544 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || || || || ||||| |||||||| || || |||| |||||| Sbjct 22229 TCTCAGACAGAGACCGGTACGCCTTACATGCTCTACAAGGACGCCTGCAACAGGAAGAGC 22170 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| ||||| |||| || ||||| | ||||| |||||||| ||| |||||||| Sbjct 22169 AACCAGCAGAATCTGGGCACCATCAAATCCAGCAATCTGTGCACGGAGATTGTAGAGTAC 22110 Query 76016 ACAGATAAGGATGA 76029 ||| || ||||| Sbjct 22109 ACAAGCAAAGATGA 22096 >seq95 Length=91801 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136 ||||| || | || ||||| |||||||| || ||||||||||| |||||| || Sbjct 11966 GAGCGAATTGTGGCTTTTGCAGCAGTGGAGGGAATATTCTTCTCCGGCTCATTCGCTGCC 11907 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 ||||||||| | |||||| | || || ||||| ||||| || ||| || || || ||| Sbjct 11906 ATTTATTGGCTCAAGAAGAGAGGACTAATGCCTGGCCTTACCTACTCCAACGAGCTGATT 11847 Query 65197 TCCCGAGATGAGG 65209 | | ||||||| Sbjct 11846 AGCAGGGATGAGG 11834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596308511314560