Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 95.1 4e-14
>seq15996
Length=6831
Score = 95.1 bits (104), Expect = 4e-14
Identities = 356/558 (64%), Gaps = 3/558 (1%)
Strand=Plus/Minus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
|| || ||||||||||| ||||| ||| | |||| | |||| || || || || |
Sbjct 1856 ATGGAGGCCAGATTACACACCGCTACCTCATCGTCGCTGGTGTACTCAACTATTTCTGTG 1797
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|| ||||| || ||||||||||| | ||||| |||||| || ||||| || ||
Sbjct 1796 CAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 1737
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAG 155768
|| ||||| || ||||| || || || || ||| |||| | || | ||| ||||
Sbjct 1736 TCTTTGTACAGCATGTACGGCGTACCGGTTTCCGTCTGGGACTCGATAATGGCGTGCCAC 1677
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGC 155828
| | | || || | ||| || || ||| |||||| | | ||||||
Sbjct 1676 ACCTGCTGAGCCTTCACCACGCGCTTGACCCTCCCCTCCTTCTCATACGTGGTGTACAGC 1617
Query 155829 GTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGC 155888
| | | ||||| || | || || ||| || ||||||| | || || | |||
Sbjct 1616 TTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGA 1557
Query 155889 GACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAG 155948
||||| || || | || | || ||| || | || ||| || || |||
Sbjct 1556 GACCAGTCTTGGTTGCTCTCCACTCTCTTCATGAACAGGTCGGGGATCCACATGGCGTAG 1497
Query 155949 AAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCC 156008
|||||||| || ||| | |||||| | ||| |||||| ||||| | ||| ||
Sbjct 1496 AAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCGGTGTTCTTCTTCAGCTCCAGGAAGTCA 1437
Query 156009 TCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC---TTGCCA 156065
| || || |||||||| ||||| ||||| || |||| |||||
Sbjct 1436 AACACGTCGAAGTGCCAGGGCTCCAGGTACATGGCAAACGCTCCGGGCCTCTTGTTGCCT 1377
Query 156066 CCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTG 156125
||||| || || || || || || || ||| |||| | ||||| || | | || |||
Sbjct 1376 CCCTGGTCGACGTAACGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACGAGCCCGTTG 1317
Query 156126 GAAGTGCCATTGGTTCCG 156143
|| |||| ||||| |||
Sbjct 1316 GAGTTGCCGTTGGTGCCG 1299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471157355503044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |