Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq471 82.4 6e-11 >seq471 Length=23154 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || ||||| || || | || || || ||||| ||| | || |||| | Sbjct 16639 AAGATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 16698 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| || ||| | || ||| ||||| ||||| || || | ||| ||| Sbjct 16699 AGCGACACCATCGAGAACGTCAAAGCTAAGATCCAGGATAAGGAGGGAATCCCCCCGGAC 16758 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || || | || || ||||||||||| |||| | || | | |||||| Sbjct 16759 CAGCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAAGACGGCCGCACTCTCTCCGACTAC 16818 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| || |||||||| || | ||| ||||| Sbjct 16819 AACATCCAGAAGGAGTCCACCCTCCACCTGGTG 16851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398706595779268