Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq20292 95.1 2e-14
seq11093 84.2 4e-11
>seq20292
Length=13069
Score = 95.1 bits (104), Expect = 2e-14
Identities = 123/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 58371 TAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGT 58430
|||| |||| | |||||||| | | ||||| || || || || | ||||||||||
Sbjct 7188 TAGCAGGAGCTCTGTGGTGGTATTTCGTCTCTAAGGGCATCGAGTATCTGGATACAGTGT 7129
Query 58431 TTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTA 58490
||||||| || |||||||| || || || |||| || || ||||| || || || | |
Sbjct 7128 TTTTCATCCTGAGGAAAAAATTCAACCAGGTTACTTTCCTGCACGTCTACCACCACTGCA 7069
Query 58491 CTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
| ||||| || | | ||| | || || |||||| | |||||||| |||
Sbjct 7068 CCATGTTCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 7019
>seq11093
Length=44841
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
||||||||||| || || ||||| | || | | | || ||||| |||||||| || |||
Sbjct 9583 TGGTGGTACTACATCTCCAAAGGAGTGGAGTTCCTGGACACAGTCTTTTTCATCCTGAGG 9524
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|| ||||| || || || ||||| || ||||| || ||||| | || ||||| | |
Sbjct 9523 AAGAAGTTCAACCAAGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTTCATCCTC 9464
Query 58505 GGATGGGTAGGTATTAAATGG 58525
| ||| | || || ||||||
Sbjct 9463 TGGTGGATCGGCATCAAATGG 9443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903015822088320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |