Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq11769 122 1e-22
>seq11769
Length=79708
Score = 122 bits (134), Expect = 1e-22
Identities = 358/537 (67%), Gaps = 25/537 (5%)
Strand=Plus/Minus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
||||| || | || || ||| |||||| |||||| ||||| ||||||||| ||| |
Sbjct 68518 GCCAGCTCCTTGGGCGAGGTGAAGTCGTCCACGTGGATGAAGGCGTCTCCCTGGATAAAG 68459
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATA-AGAGA 177064
|| ||||| |||| || | | || || || | || || | || || | ||||
Sbjct 68458 TTCTCGTAGTTCTGCCTGGGCGGGCCAAGAACCACTGGCACTGTCCC---CACAGAGAGT 68402
Query 177065 TCG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAG 177122
| ||| |||||||| ||||| |||||| |||| | |||||||||||| || || |||
Sbjct 68401 GGGTTGTACAGTTTTTCAGTAATGTAGTCCTTGTGGATGGAGTTCTCAAAAGCCAGGTAG 68342
Query 177123 AATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTA 177180
|| |||||| | ||| || |||| | |||| | || | || || || || |
Sbjct 68341 AACTTACAGCTGGCGATGGT--GGGGAAGTAGTCTTGGTCAGAGATGTACTCCCCGAAGG 68284
Query 177181 CGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCA 177240
| | || || | || | || |||||||| ||||| ||||||| || | ||
Sbjct 68283 CTTGTCCATACGCGTGAACCTCAATGTGTTTGTACAGCTCATTGTAGTATTTCACCCGCA 68224
Query 177241 CGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGGAACGG 177300
||||||| | |||||| ||||| || | |||||| | | |||| | ||||| || ||
Sbjct 68223 CGTGGTCCTGGTTCCAGTTGCTCACAATCCAGCAGATCAGCTTG-TTTTTGCTGG-GTGG 68166
Query 177301 GATTCGATACTAAT-GCAGTGTCTCTGAGCGTTAGT-GATCCATAGGGCACGTGAATATC 177358
|| | | || || | | || || | | || ||||| ||||| | ||| ||
Sbjct 68165 GACAAAGTCTTCATCGCCCT-CCGCT--GCTACAATGGACCCATAAGGCACTTCAATGTC 68109
Query 177359 CGAGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTG----TTTGA 177414
| || | | ||| | | || |||||||| | ||| || || || | | ||
Sbjct 68108 AGCATCCTGACGGTAATTGAGAGTCAGATTGAACATGTTCTCGATCCCAGGCAGCTGGGA 68049
Query 177415 AGGGGCTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTC 177471
|| | ||| || || || || |||||||||||||||||||| || |||| |||||
Sbjct 68048 AGAG--TGTGAC--GGTGACTCCAAGTTCATCCATATCCACTTCTGGAAGGATGGTC 67996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578178849235200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |