Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq27843 149 7e-31
>seq27843
Length=4971
Score = 149 bits (164), Expect = 7e-31
Identities = 141/180 (78%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| || || || | ||| || | ||||||||| || || | |||||||| || |||||
Sbjct 1799 CTTGAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCAATATTGAA 1858
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| ||||| |||||||| || ||||| | |||||||||||| ||||| ||||| |||||
Sbjct 1859 AGGCACCCCGAGGCCCATATCACCCGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTC 1918
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161
|||||| ||||| |||||| |||||| || ||||| |||||| ||||| ||| ||
Sbjct 1919 ACACACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGTGGGGCATGTCTGC 1978
Score = 86.0 bits (94), Expect = 7e-12
Identities = 109/147 (74%), Gaps = 6/147 (4%)
Strand=Plus/Plus
Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335
|||| ||| |||||||||||||||||||| || ||||| || ||||||||||| ||
Sbjct 2961 GTACTCGGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCCAGGTCGCCTTCCTC 3020
Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
|| | | ||| |||| | ||| || || || ||||||||| ||| ||||||||
Sbjct 3021 TCGATCTGTGAA-CCCG--AGGTTGTCCAGGAAGTCCCGGGACCCGTTGGCATCCCAGAT 3077
Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTT 147419
||| || || || |||||||| ||
Sbjct 3078 CTTCACCCCTTTCGCCGAGAGCTCTTT 3104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583232636476800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |