Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq471 111 1e-19 >seq471 Length=23154 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | || || |||| |||||||| || || || || Sbjct 16833 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCAGCTGTTTGCCGGCGAA 16774 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||||| || | | |||||| ||| |||| || |||| || Sbjct 16773 GATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTATCCTGGATC-TTAGCTTTGACGT 16715 Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||||| | |||||||||| ||||| || ||||| || | || |||| Sbjct 16714 TCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTCA 16655 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 16654 CAAAGATCTGCAT 16642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450596310180960