Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq471 158 3e-33
seq21676 98.7 2e-15
seq11213 95.1 3e-14
>seq471
Length=23154
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || |||||||| || |||||||| || || | || || | || |||
Sbjct 16853 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCT 16794
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| ||||| |||||||| || | || ||||| || || | ||| ||||| |||
Sbjct 16793 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTATCC 16734
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| ||||| ||||||||||| | || ||||| || ||||| |||
Sbjct 16733 TGGATCTTAGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 16674
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| ||||| ||||| | |||||| ||
Sbjct 16673 TTACCGGTGAGGGTCTTCACAAAGATCTGCATCTT 16639
>seq21676
Length=13877
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007
||||| | ||||| |||||||||||||| || ||||| || | || || ||||| |||
Sbjct 11 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 70
Query 211008 ACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC 211054
| |||||||||||||||||||| |||||||| || ||||||||
Sbjct 71 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTC 117
>seq11213
Length=49864
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 139822 GGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAAC 139881
|| |||||||| || |||||||||||||||| | || ||| ||| ||||| ||||||
Sbjct 16374 GGCAGAGGAGGGCAGTCTGCTCTGCGTTTTGCTCGTCTGAGAATGGAGAAGAGACACAAC 16433
Query 139882 TACTTGAGAAAAGTTGCAGAGAACGCAATACAG-TGTTT-TATC-AAAGACAACAAGTGT 139938
|| |||||||||| || |||| || | ||| | ||| | || || |||| |||| |
Sbjct 16434 TATGTGAGAAAAGTGGCTGAGACGGCTGTCCAGCTCTTTGTGTCTAATGACA--AAGT-T 16490
Query 139939 TTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTCCTGGAATCT 139998
||| | || || || ||||| || || || || |||||||| ||||| | |||
Sbjct 16491 AATGTGGCAGGAATGGTCTTGGCTGGCTCTGCCGACTTCAAGACCGAGCTCAGCCAGTCT 16550
Query 139999 GACTTTTTTGACCC 140012
||| | || |||||
Sbjct 16551 GACATGTTCGACCC 16564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158632014555380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |