Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq471 109 5e-19
>seq471
Length=23154
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
||||| || | ||| | ||||| || || ||| ||| || || || || || ||||
Sbjct 16868 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 16809
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || |||| || ||||||||||| || || || || | ||||||||| | |||
Sbjct 16808 AGAGTGCGGCCGTCTTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGG 16749
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237
| | ||| || ||| ||| || ||||| || | | || ||||| | ||||||
Sbjct 16748 ATTCCCTCCTTATCCTGGATCTTAGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 16689
Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|||| ||||| | || || || || || || |||||||| ||||||||
Sbjct 16688 TCCAGGGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCATCTT 16639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429362309133956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |