Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 365 6e-96
seq25531 84.2 3e-11
>seq15996
Length=6831
Score = 365 bits (404), Expect = 6e-96
Identities = 1263/1961 (64%), Gaps = 23/1961 (1%)
Strand=Plus/Minus
Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120
||||| || || || |||||| | |||||| || | || | || || ||||||||
Sbjct 2480 TTCTTCATCTCCTCGCTCCACAGTCCCCTCTCCGTCAGGTCTTTGAGCAGGTGAGGATTC 2421
Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180
||||| ||||| ||||| || | || || || ||||| || || ||||| || | |||
Sbjct 2420 ACTATCTGAAACTCTCCCGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 2361
Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240
| || || ||||| |||| || || || || || || || ||||| || |||| ||
Sbjct 2360 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 2301
Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300
| || || || | || || | ||| || || || || ||||| ||| ||
Sbjct 2300 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGGGCCTTCCAGTCCAGCAGG 2241
Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360
|| | || ||||| | ||||| || || || || || || | || ||
Sbjct 2240 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACCGGAGAGCCT 2181
Query 77361 TTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || || || || || || || | | || || || || ||||| |||| ||
Sbjct 2180 TCGTACGTCTCGTAGGGGCCGAGCTCAG---CGGCCAGCTCGCAGCTCGCCTCCAGGGCG 2124
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|||| || || || || || || | | || || || || || || || |||
Sbjct 2123 GCGTAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGAGCCTCGGGGCTTTCGAAC 2064
Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537
|| || | | || || ||||| ||||| || ||||| || || || || || || ||
Sbjct 2063 GGGTAGCGCATGAGGATGAAGGCGTCTGCCAAACCCTGCACGCCGATTCCGATCGGCCTG 2004
Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTA 77597
|| | ||| ||||| | | ||||| || | || || || || || || ||||| ||
Sbjct 2003 TGGCGCTTGTTGGACTTCTCCGCTTCAGGCACTGGGTAGTAGTTGATTTCGATAATCTTG 1944
Query 77598 TTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA 77657
|| | ||| | || | ||||| ||| | |||||| ||| ||||| | |
Sbjct 1943 TTCAAGTTTTTGACGATGACTTTGGTCACAAACGCTAGTTTTTTAAAGTCAAAAGTCCGC 1884
Query 77658 TCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTA 77714
|| | || ||||||| | || || || || |||||||| || ||||||||||
Sbjct 1883 TCAGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGATTACACACCGCTACCTCATCG 1824
Query 77715 GCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTT 77774
|| ||| || | | ||| || || || || || || | |||||| |||||||||||
Sbjct 1823 TCGCTGGTGTACTCAACTATTTCTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTC 1764
Query 77775 TGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCA 77834
|| ||||||||||| | ||||| | ||| || || || || |||| || ||||||||
Sbjct 1763 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCC 1704
Query 77835 ATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATC 77892
|||| || |||||||| | | ||| || || || ||| || | || ||| |
Sbjct 1703 GTCTGGGACTCGATAATGGCGTGCCACAC--CTGCTGAGCCTTCACCACGCGCTTGACCC 1646
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952
|| ||| | ||||| || || ||| || || || || ||||| || ||||
Sbjct 1645 TCCCCTCCTTCTCATACGTGGTGTACAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCA 1586
Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012
|| ||||| || || || ||||||| |||||||| | || |||| ||||
Sbjct 1585 GCCCGGGGCACTCGTTCGGACACATCAGAGACCAGTCTTGGTTGCTCTCCACTCTCTTCA 1526
Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072
| || || || || ||||| | || || || |||| || || || || || ||||
Sbjct 1525 TGAACAGGTCGGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTC 1466
Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132
| || ||||| || || || || || || | | || | ||||| || || || || |
Sbjct 1465 CGGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCGAAGTGCCAGGGCTCCAGGTACA 1406
Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192
| || | |||| || | || || |||||||| || | || | || ||||| || |
Sbjct 1405 TGGCAAACGCTCCGGGCCTCTTGTTGCCTCCCTGGTCGACGTAACGCGCCGTGTTGTTGT 1346
Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252
| ||||||| ||| || | | ||||| || | || || || || | || || || |
Sbjct 1345 AGACTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCC 1286
Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| | | || || || | | | || ||||| || ||| ||| || || || |
Sbjct 1285 CCGTCGATCGGATGCAGCTGACCGCCACGCCGATTCCCCCGGCCGACTTGGAGATGAGGG 1226
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372
| || | |||| || ||||| || || || || ||||| ||| ||||| || || |
Sbjct 1225 CACACTGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGA 1166
Query 78373 AACAGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428
| ||||| |||| || || || ||||| || || || | || || || ||
Sbjct 1165 AGCAGCTGGACAGCTGTGGCCTGTTG----GTTCCCGCGTTGAAGAGCGTGGGGGAGGCG 1110
Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488
|| || ||||| || || || || || ||||| || ||||| |||| |||||| |
Sbjct 1109 TGGGTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCAATGGCTGCGCTGATGTCCGTT 1050
Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548
| || || || || | ||| | ||| | ||| ||||| || | || || ||
Sbjct 1049 TTGTGGATCCCGACAGATACTCTCATGAGCATGTGCTGCGGACGCTCCGCCACTTTGCCG 990
Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608
|| || ||||||| ||| || |||| || || || || || ||||||| || ||
Sbjct 989 TTGATCTTCAACAGGTAGGACCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTAGGAGAAA 930
Query 78609 TCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATG 78668
|| | ||| | || || | || || || ||||||| | | ||| || || | |
Sbjct 929 TCGCGGTCGAAGATGATGGCTGAGTTGAGGCGGTCTTTGTTCTCGAGAACGATGTCGA-G 871
Query 78669 ACAGTAGTT-GAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAA 78727
| || || || || ||||| | | ||| || || | ||||| | |
Sbjct 870 CGTCTCCTTGGAGATCATGGGAGAGTGGCGTCTATTCAAGGGGTTGATGTAGTTGTACAG 811
Query 78728 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTAT 78787
|| ||||| || ||||| || | || || || || ||||| || || || || || ||
Sbjct 810 GTCCTCCATCACGTCACTGAACACCTTCTTCGTCTCTTTGTGCAGGTTTGAGACGGCGAT 751
Query 78788 TCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGC 78847
| |||||| || || || || || || |||| || || ||||| || || |||||
Sbjct 750 CCGTGCAGCGAGGATGGCGTAGTCGGGGTGTTTGGTTGTGAGGGTGGCGGCGATCTCTGC 691
Query 78848 CGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCAT 78907
|| | | || | ||| | |||||||| || | || | || || || || |||||
Sbjct 690 GGCCAGCGTGTCGAGCTCCACGGTTGTGACGCCGCTGTACAAACCCTGGATCACCTTCAT 631
Query 78908 GGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACG 78967
| || | | ||||| ||||| |||| ||||| || || || | || || ||
Sbjct 630 CGTAATCTGGGTCGGATCCACAAAGTCAGGGTTCAGCCCGTAGCACAGCTTCTGGATGCG 571
Query 78968 AGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
||| ||||||||||| || || || ||| | || |||||
Sbjct 570 AGACGTGATTTTATCGAACATGACGCGCTCTTGGCGTCCAT 530
>seq25531
Length=26544
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
||||| || || ||||| || ||||||| ||||||||||| || ||||||||||| |
Sbjct 22120 ATCTCCGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTG 22179
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAAT 77851
||||| | |||||| || || || | || || ||||| || |||| || || || ||
Sbjct 22180 TTGCAGGCGTCCTTGTAGAGCATGTAAGGCGTACCGGTCTCTGTCTGAGACTCAATGAT 22238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694364778199680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |