Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq15996 363 2e-95
seq95 93.3 6e-14
>seq15996
Length=6831
Score = 363 bits (402), Expect = 2e-95
Identities = 1250/1943 (64%), Gaps = 21/1943 (1%)
Strand=Plus/Minus
Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715
||||| ||||| || |||||| | ||||| || | || | || || ||||||||
Sbjct 2480 TTCTTCATCTCCTCGCTCCACAGTCCCCTCTCCGTCAGGTCTTTGAGCAGGTGAGGATTC 2421
Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775
|| || ||||| ||||| || | || || || ||||| || || ||||| || | |||
Sbjct 2420 ACTATCTGAAACTCTCCCGAGAGCACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCTTCG 2361
Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835
| || || ||||| |||| || || || || || || || ||||| || |||| ||
Sbjct 2360 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGC 2301
Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895
| || || || | || || | ||| || || || || ||||| ||| ||
Sbjct 2300 AGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGGGCCTTCCAGTCCAGCAGG 2241
Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955
|| | || ||||| | ||||| || || || || ||||| | || ||
Sbjct 2240 TCGGTGGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTGCTGACCGGAGAGCCT 2181
Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015
| || || ||||| | ||| || | || || ||||| |||||||| | || ||
Sbjct 2180 TCGTACGTCTCGTAGGGGCCGAGCTCAGCGGCCAGCTCGCAGCTCGCCTCCAGGGCGGCG 2121
Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075
|| || || || || || || | | || || || || || | || || || ||
Sbjct 2120 TAGTAGATGGTCTCAAAGATTTGAATGTTCAGCAGCTGAGCCTCGGGGCTTTCGAACGGG 2061
Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135
|| | | || || || || ||||| | ||||| || || || || || || || ||
Sbjct 2060 TAGCGCATGAGGATGAAGGCGTCTGCCAAACCCTGCACGCCGATTCCGATCGGCCTGTGG 2001
Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195
| ||| ||||| | || ||||| || | ||||| || || || || ||||| || ||
Sbjct 2000 CGCTTGTTGGACTTCTCCGCTTCAGGCACTGGGTAGTAGTTGATTTCGATAATCTTGTTC 1941
Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255
| ||| |||| | ||||| ||| | |||||| ||| ||||| | | ||
Sbjct 1940 AAGTTTTTGACGATGACTTTGGTCACAAACGCTAGTTTTTTAAAGTCAAAAGTCCGCTCA 1881
Query 76256 A---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
| || |||| || || || || || || |||||||| || |||||||||| |
Sbjct 1880 GGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGATTACACACCGCTACCTCATCGTCG 1821
Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372
||| || | | ||| || ||||| || || || | ||||| || || ||||| ||
Sbjct 1820 CTGGTGTACTCAACTATTTCTGTGCAGAGGTTGCTGCTTTTGATGGTGCCCAGATTCTGC 1761
Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432
||||||||||| |||| || | ||| || || || | |||| || || ||||| ||
Sbjct 1760 TGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTACCGGTTTCCGTC 1701
Query 76433 TGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGTATCGCT 76490
|| || |||||||| | | ||| || || || ||| || | | ||| | |
Sbjct 1700 TGGGACTCGATAATGGCGTGCCACAC--CTGCTGAGCCTTCACCACGCGCTTGACCCTCC 1643
Query 76491 TCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAAC 76550
||| | ||||| || || | | || || || || ||||| || |||| |
Sbjct 1642 CCTCCTTCTCATACGTGGTGTACAGCTTCTCGAACTCCTCCCCCCAGCACTCGTCCAGCC 1583
Query 76551 CAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAA 76610
| || || || ||||||||||||| ||||| || | || || | ||||| |
Sbjct 1582 CGGGGCACTCGTTCGGACACATCAGAGACCAGTCTTGGTTGCTCTCCACTCTCTTCATGA 1523
Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTG 76670
| || || || ||||| | || || || |||| || || | || || ||||| |
Sbjct 1522 ACAGGTCGGGGATCCACATGGCGTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCGG 1463
Query 76671 TATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 76730
| ||||| || || || ||||| || | | || | ||||| || || || || || |
Sbjct 1462 TGTTCTTCTTCAGCTCCAGGAAGTCAAACACGTCGAAGTGCCAGGGCTCCAGGTACATGG 1403
Query 76731 CCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAA 76790
| | | || || | || || |||||||| || | || | || ||||| || || |
Sbjct 1402 CAAACGCTCCGGGCCTCTTGTTGCCTCCCTGGTCGACGTAACGCGCCGTGTTGTTGTAGA 1343
Query 76791 CTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCAC 76850
|||||| ||| || | | ||||| || | || || || || | || || || ||
Sbjct 1342 CTCTCAGCATGGGGACGAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCCG 1283
Query 76851 ATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 76910
| || || || | | | ||| ||||| || ||| || ||||| || ||||
Sbjct 1282 TCGATCGGATGCAGCTGACCGCCACGCCGATTCCCCCGGCCGACTTGGAGATGAGGGCAC 1223
Query 76911 AGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAAC 76970
| | |||| ||||| || ||||| || || || || ||| ||||| || || || |
Sbjct 1222 ACTGCTTCAGCGTGTCGTAAATGCCTTCGATGCTGTCGTCCTTCATGGCGAGCAGGAAGC 1163
Query 76971 AGCTAGACATTTG----ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
|||| |||| || || || ||||| || || || | || || || || ||
Sbjct 1162 AGCTGGACAGCTGTGGCCTGTTG----GTTCCCGCGTTGAAGAGCGTGGGGGAGGCGTGG 1107
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086
|||||||| || || || || || ||||| || ||||| |||| || ||| ||
Sbjct 1106 GTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCAATGGCTGCGCTGATGTCCGTTTTG 1047
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| || || |||| || | ||| | ||| ||||| || || || | || ||
Sbjct 1046 TGGATCCCGACAGATACTCTCATGAGCATGTGCTGCGGACGCTCCGCCACTTTGCCGTTG 987
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206
|| ||||||| ||| || |||| || || || || || ||||||| || || ||
Sbjct 986 ATCTTCAACAGGTAGGACCGCTCCAGCGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATCG 927
Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACA 77266
| ||| | || || | || || || ||| || | | | ||| || || ||
Sbjct 926 CGGTCGAAGATGATGGCTGAGTTGAGGCGGTCTTTGTTCTCGAGAACGATGTC---GAGC 870
Query 77267 GT---GGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAG 77323
|| | || || || ||||| | || ||| || || | ||||| | | |
Sbjct 869 GTCTCCTTGGAGATCATGGGAGAGTGGCGTCTATTCAAGGGGTTGATGTAGTTGTACAGG 810
Query 77324 TCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATT 77383
|| ||||| ||||| || || | || || || || ||||| || || || ||||| ||
Sbjct 809 TCCTCCATCACGTCACTGAACACCTTCTTCGTCTCTTTGTGCAGGTTTGAGACGGCGATC 750
Query 77384 CTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCC 77443
| ||||| || || || ||||| || |||| || ||| |||||| || || |||||
Sbjct 749 CGTGCAGCGAGGATGGCGTAGTCGGGGTGTTTGGTTGTGAGGGTGGCGGCGATCTCTGCG 690
Query 77444 GCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATG 77503
|| | || || | || | || || || ||| | || | || || || || |||||
Sbjct 689 GCCAGCGTGTCGAGCTCCACGGTTGTGACGCCGCTGTACAAACCCTGGATCACCTTCATC 630
Query 77504 GCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATACGA 77563
| || | | | ||||| ||||| || | ||||| || || || | || || |||
Sbjct 629 GTAATCTGGGTCGGATCCACAAAGTCAGGGTTCAGCCCGTAGCACAGCTTCTGGATGCGA 570
Query 77564 GATGTGATTTTATCAAACATGAC 77586
|| ||||||||||| ||||||||
Sbjct 569 GACGTGATTTTATCGAACATGAC 547
>seq95
Length=91801
Score = 93.3 bits (102), Expect = 6e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
||||| || ||||| | ||||| || | || || |||||||||||||| | ||| |||
Sbjct 11836 TCATCCCTGCTAATCAGCTCGTTGGAGTAGGTAAGGCCAGGCATTAGTCCTCTCTTCTTG 11895
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
|||||| | || || ||||| || || || |||||||| || || || || || || ||
Sbjct 11896 AGCCAATAAATGGCAGCGAATGAGCCGGAGAAGAATATTCCCTCCACTGCTGCAAAAGCC 11955
Query 46774 ACAAGTCTCTCTCC 46787
|||| || ||| ||
Sbjct 11956 ACAATTCGCTCCCC 11969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712622384259840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |