Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16]
35,012 sequences; 585,166,552 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq471 156 3e-33
>seq471
Length=23154
Score = 156 bits (172), Expect = 3e-33
Identities = 174/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || ||||| | | ||||||||| || ||| |||||| ||||||||||| ||||
Sbjct 16870 TTCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 16811
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||| ||| |||| |||||||| || ||||| ||||||| | |||||| || | |
Sbjct 16810 AGAGAGTGCGGCCGTCTTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGG 16751
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287
| | || ||||| ||| ||||| |||| | |||| | ||||||||| || |||
Sbjct 16750 GGATTCCCTCCTTATCCTGGATCTT-AGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCC 16692
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| || |||||||||||||| ||||| |||||
Sbjct 16691 ACCTCCAGGGTGATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCAT 16642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359836788946404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |