Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Morone_20saxatilis_20[genbank_20GCA_5F001663605.1_202016-06-16] 35,012 sequences; 585,166,552 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq471 150 2e-31 >seq471 Length=23154 Score = 150 bits (166), Expect = 2e-31 Identities = 168/222 (76%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || ||| ||||||||| ||||| ||||||||||| ||||| Sbjct 16859 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGG 16800 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||| ||||||||||| ||||| | ||| ||||||| ||| | | |||| Sbjct 16799 CCGTCTTCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCC 16740 Query 41765 TTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || ||| || | || |||| ||| | | |||||||| | ||||||||||| || Sbjct 16739 TTATCC-TGGATCTTAGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGT 16681 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || ||||| || || ||||| || || |||||||| || Sbjct 16680 GATGGTCTTACCGGTGAGGGTCTTCACAAAGATCTGCATCTT 16639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462101672654400