Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq36 127 1e-24 >seq36 Length=5414369 Score = 127 bits (140), Expect = 1e-24 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 || ||||||||| | || | ||| |||||||| || ||||| || ||||| ||||| ||| Sbjct 2792085 TGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCTAATCCC 2792144 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGA 101878 ||||||||||| | || ||||| ||||| || |||| |||||||| || || || || Sbjct 2792145 ATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATCACACACGTAGAACTGG 2792204 Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 | | | |||| || || |||| | |||| |||||| ||||| |||| Sbjct 2792205 CAGAGTGCATGGCAGGGGGGCAGCGCCATCCTAGGAAGGTCTGCAACA 2792252 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 || ||||| || || ||||||||||| || |||||||||||||| || || || || ||| Sbjct 2792895 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCCTCT 2792954 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 |||||| || ||||| || || | || | ||| || || |||||||| || | | Sbjct 2792955 CTGTCAGTGAACCCAAGGTTGTCCAGGAAGTCCCGAGACCCGTTGGCATCCCAGATCTTC 2793014 Query 102158 ACGCCAGCTGCTGATAGCTCTTTG 102181 || || | |||| ||||| ||| Sbjct 2793015 ACTCCTTTTTCTGACAGCTCCTTG 2793038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361211139386849