Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq36 131 2e-25 >seq36 Length=5414369 Score = 131 bits (144), Expect = 2e-25 Identities = 128/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || || | ||| || | ||||||||| || || || |||||||| |||||||| Sbjct 2792069 CTTGAGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAA 2792128 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| | ||||| || | ||||||||||||||||| || || ||||| || | Sbjct 2792129 AGGCACCCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCATC 2792188 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||||||||||| || |||||||| ||||| ||||| Sbjct 2792189 ACACACGTAGAACTGGCAGAGTGCATGGCAGGGGGGCAGCGCCAT 2792233 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||||||||||||||| || || || || || ||||| || ||| Sbjct 2792894 GTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCCTC 2792953 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 |||| | ||| | | ||||||||||| ||||||||||| ||||||||||| Sbjct 2792954 TCTGTCAGTGAACCCAAGGTTGTCCAGGAAGTCCCGAGACCCGTTGGCATCCCAGATCTT 2793013 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 || || | | || ||||| ||||| | || || ||| Sbjct 2793014 CACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCC 2793053 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 ||||||||||||| |||||||| || |||| ||| |||||||| || ||||| || |||| Sbjct 2793144 CCCTGATGAACCACAGCAGCTCCTCAAGGATCCCTCTCCAGAACACTCTCTTTGTTGTCA 2793203 Query 146258 GCAGGGGGAACTGG 146271 |||||| |||||| Sbjct 2793204 ACAGGGGAAACTGG 2793217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590009686139960