Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq65 100 2e-16 seq92 82.4 5e-11 >seq65 Length=3759856 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| || | || |||| ||||||||| || || Sbjct 3001544 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAG 3001485 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 || |||| |||||||||| ||| | || ||||| || || ||||| ||| | || Sbjct 3001484 ATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATC--CTGGATTTTGGCCTTGACAT 3001427 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | || || || | |||||||| || || || || ||||||| Sbjct 3001426 TCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCA 3001367 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 3001366 CAAAGATCTGCAT 3001354 >seq92 Length=2575742 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| | || | || ||||||||| | || Sbjct 2563780 TCATTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTTCAGCTGCTTGCCATCAAAG 2563839 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || |||| ||||||||| || | || ||||| || || ||| || || ||| Sbjct 2563840 ATCAGCCTCTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGAT-TTTAGCCTT-GATGT 2563897 Query 34319 GCT--ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 || || | ||| | | || || |||| |||||||| ||||| ||||| || |||| Sbjct 2563898 TCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 2563957 Query 34377 CAAAGATCTGCAT 34389 | ||||||||||| Sbjct 2563958 CCAAGATCTGCAT 2563970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323036173233440