Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq38 136 4e-27 >seq38 Length=4945250 Score = 136 bits (150), Expect = 4e-27 Identities = 927/1478 (63%), Gaps = 15/1478 (1%) Strand=Plus/Minus Query 37075 TTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTT 37134 ||||| || || | ||||||||| || | | || ||| | | ||||| || || Sbjct 1347762 TTCTTCATCTCCTCATTCCACATGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 1347703 Query 37135 ACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCA 37194 || | |||||| || || || | || | | || || || ||||| || || | || Sbjct 1347702 ACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCG 1347643 Query 37195 ATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGA 37254 |||||||| || || | | || || | || || || || ||||| || | | || Sbjct 1347642 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGACAGCAGC 1347583 Query 37255 AGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAA 37314 ||||| || |||| |||||| | || ||| || || ||||| ||||| | Sbjct 1347582 AGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 1347523 Query 37315 TCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCG 37374 || ||||| |||| |||||| || || || ||||| || |||||| | || || | Sbjct 1347522 TCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGAGCCT 1347463 Query 37375 TTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCA 37434 | || |||||||| | ||| || || ||||| || | ||| | |||||| Sbjct 1347462 TCGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCA 1347403 Query 37435 TAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCA 37494 ||||| ||||| || || || || || || | | || || || ||| || || | | Sbjct 1347402 TAATACATTGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAAAGGGA 1347343 Query 37495 TAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGT 37554 || | || | || || |||||||||| ||||| || ||||| ||||| || || || Sbjct 1347342 TAACGCATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCTGTGG 1347283 Query 37555 TTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTT 37614 | | || || || | |||| ||| || || || ||||| || || | || || Sbjct 1347282 CGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTTGTTC 1347223 Query 37615 AGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATAAATACG-TTA 37671 | || | || | || ||| || | | ||| || | || ||||| | || | | Sbjct 1347222 AAGTTCCTGACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCATAAGTCCGCTCA 1347163 Query 37672 TTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCG 37731 | || | | | | | | ||| | ||||| || || || || || || | | Sbjct 1347162 GGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGTCCTTG 1347103 Query 37732 TTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTT 37791 || | | | | || || || || || || || | | || || |||| ||| Sbjct 1347102 CTAGTGTACTCGACGATTTCCGTGCAAAGGTTGCTGCACTTGATGGTGCCCAGATTCTGC 1347043 Query 37792 TGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATT 37851 || ||| || | || || | |||||| || | || |||||||| || |||| | Sbjct 1347042 TGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTC 1346983 Query 37852 TGAGCCTCGATAATAGATTTCCATAAACTTCT-TGCTTTAACGA-TCGCTTTAAtttttt 37909 || | |||||| || | | |||| | || || || || || | ||| || | | Sbjct 1346982 TGCGACTCGATGATTGCATACCAT-AGCTGCTGAGCCTTCACCACACGC-TTCACCCTCC 1346925 Query 37910 tCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCAT--AA 37967 || | || ||| | || | || | ||| || | |||||| || | ||| | Sbjct 1346924 CCTCCCTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCA-GCA-CTCATCCAG 1346867 Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 || || || ||| |||||||| || ||||| ||| | || || || || | ||| Sbjct 1346866 CCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTGTGTTGTTCTCCACCCGCTTCAT 1346807 Query 38028 AAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTTCC 38086 || | ||||| | ||| | || ||| || || || ||| || | || || || | Sbjct 1346806 GAAGAGGTCAGGGATCCACAGGGC-GTAGAACAAGTCCCTGGCTCGCTGCTCCTCCTTTC 1346748 Query 38087 CTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAA 38145 | ||| ||||| |||| ||||| ||||| | ||| |||||| || || | || Sbjct 1346747 CCGTGTTC-TTCTTCAGCTCCAGAAAGTCGAACACATCGAAGTGCCAGGGCTCCAGGTAC 1346689 Query 38146 ATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTA 38205 || | | || || |||||||| | || ||||||| || ||| | ||||||| || Sbjct 1346688 ATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTG 1346629 Query 38206 TATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTA 38265 || | || ||||| || || | || || || |||||| | |||| || || | Sbjct 1346628 TAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATGTAGCTC 1346569 Query 38266 CCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAA 38325 ||| | | || || || | | || || || || || || ||| || || | Sbjct 1346568 CCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCGGCTGATTTGGAGATGAGG 1346509 Query 38326 GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATA 38385 ||||| || || | ||| || | || || || || ||||||||||| || | || | Sbjct 1346508 GCGCAATGCTTCAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGG 1346449 Query 38386 AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGT 38445 || || || |||| || ||| ||||| || || || | || || || || || Sbjct 1346448 AAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGG 1346389 Query 38446 ATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCG 38505 ||||||| || || |||| || || || || || | | | ||||| || Sbjct 1346388 GTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCGATGGCTTTTTTGATATCTGTCCCA 1346329 Query 38506 TGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 || || || | || |||||||| ||||| || || || Sbjct 1346328 TGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGG 1346291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468471511160560