Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq38 145 1e-29 >seq38 Length=4945250 Score = 145 bits (160), Expect = 1e-29 Identities = 330/492 (67%), Gaps = 12/492 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||| | || ||||| | ||| | ||| |||| || |||||| || Sbjct 1346654 CAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGAT 1346713 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || |||||| | ||| || || ||| | || || ||| |||||||||||| Sbjct 1346714 GTGTTCGACTTTCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGCCAGGGAC 1346773 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 ||||| || || || ||| | || || | ||||||||||| || ||| || | Sbjct 1346774 TTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACACAG-- 1346831 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 ||||| ||| ||||| || | | | ||||| ||| || |||||||| || ||| Sbjct 1346832 -ACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAG 1346890 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCG---AT 97169 ||||| | ||||| || ||| ||||| || |||| || || | | Sbjct 1346891 TTTGAAGAACTCTACACCAGATATGAGAGGGAGGG--GA-GGGTGAAGCGTGTGGTGAAG 1346947 Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 || | | || ||| | || ||| | | | ||| ||| || || || |||||||| Sbjct 1346948 GCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATG 1347007 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 ||||||| ||| || || | || |||||||| | | |||||||||||||| || Sbjct 1347008 GTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGC 1347067 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||| || ||||||||||| || |||||| | ||||||| ||| |||||| | Sbjct 1347068 AGCAACCTTTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGCAAT 1347127 Query 97350 CTGGCATCGGTC 97361 ||||| || ||| Sbjct 1347128 CTGGCCTCTGTC 1347139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740974913779240